May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
VX Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0006] and [V:0061]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.4 0.1 -0.1 0.3 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.3 0 -0.1
F 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1
I 0 -0.2 -0.1 -0.2 -0.3 0 0 -0.1 0 0 1.1 0.4 0 0 -0.1 0 0 -0.3 0 0.6
L 0 -0.1 -0.2 -0.1 0.2 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0.8 0 -0.1
V 0.1 0.1 0.3 0.3 0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.7 0 -0.1 -0.1 0.3 -0.1 -0.1 0.8 -0.1 -0.1
M 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
W 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Y 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
D 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
E 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
K 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
R 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
H 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
N 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Q 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
S 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
T 0 -0.1 0.4 -0.1 0 0 0 -0.1 0 0 -0.1 0 0 0 -0.1 0 0 -0.1 0 0.4
G 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
P 0 0.5 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
C 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0006 0.3 0.1 0.9 0.7 0.6 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0.4 -0.3 0.2 -0.3
0061 -0.2 1 0.9 0.4 0.9 -0.2 -0.4 -0.2 -0.4 -0.4 -0.1 0.1 -0.4 -0.4 -0.1 -0.4 -0.4 1 -0.4 0.4
Select residue pair below:
i_j Score Prob
0056_0061 2.897 1.00
0180_0184 2.584 1.00
0308_0311 2.391 1.00
0113_0159 2.191 1.00
0183_0212 2.177 1.00
0303_0309 2.138 0.99
0151_0185 2.085 0.99
0166_0178 2.055 0.99
0207_0256 2.031 0.99
0081_0085 2.023 0.99
0151_0184 1.982 0.99
0131_0162 1.977 0.99
0196_0267 1.959 0.99
0167_0267 1.902 0.99
0140_0177 1.893 0.98
0004_0009 1.845 0.98
0226_0298 1.813 0.98
0167_0196 1.782 0.97
0080_0084 1.781 0.97
0079_0083 1.771 0.97
0079_0092 1.762 0.97
0215_0261 1.752 0.97
0083_0092 1.751 0.97
0179_0212 1.733 0.97
0155_0185 1.733 0.97
0092_0115 1.674 0.96
0299_0303 1.661 0.96
0157_0187 1.655 0.96
0134_0153 1.642 0.95
0063_0089 1.639 0.95
0260_0314 1.631 0.95
0263_0319 1.623 0.95
0093_0123 1.621 0.95
0208_0211 1.606 0.95
0157_0164 1.563 0.93
0076_0092 1.556 0.93
0166_0194 1.555 0.93
0179_0214 1.543 0.93
0154_0164 1.504 0.92
0309_0313 1.491 0.91
0252_0255 1.487 0.91
0067_0093 1.480 0.91
0215_0319 1.463 0.90
0155_0159 1.458 0.90
0202_0205 1.457 0.90
0189_0192 1.440 0.89
0147_0151 1.438 0.89
0120_0162 1.421 0.88
0140_0147 1.404 0.87
0147_0180 1.402 0.87
0003_0010 1.392 0.87
0063_0321 1.380 0.86
0151_0181 1.379 0.86
0135_0270 1.363 0.85
0219_0222 1.360 0.85
0097_0266 1.347 0.84
0210_0261 1.343 0.84
0293_0298 1.338 0.84
0068_0076 1.335 0.84
0147_0181 1.331 0.83
0023_0196 1.329 0.83
0005_0008 1.326 0.83
0315_0319 1.322 0.83
0138_0166 1.310 0.82
0164_0274 1.309 0.82
0136_0153 1.302 0.82
0168_0175 1.286 0.80
0059_0296 1.259 0.78
0199_0220 1.258 0.78
0215_0322 1.254 0.78
0018_0320 1.253 0.78
0077_0111 1.253 0.78
0158_0187 1.224 0.76
0178_0216 1.222 0.75
0069_0135 1.221 0.75
0017_0295 1.218 0.75
0216_0261 1.212 0.75
0135_0267 1.209 0.74
0210_0222 1.207 0.74
0146_0268 1.206 0.74
0050_0086 1.201 0.74
0252_0256 1.198 0.73
0188_0192 1.197 0.73
0118_0122 1.194 0.73
0144_0147 1.194 0.73
0057_0062 1.193 0.73
0138_0178 1.188 0.73
0019_0266 1.187 0.72
0180_0185 1.187 0.72
0138_0174 1.182 0.72
0113_0160 1.174 0.71
0135_0268 1.162 0.70
0261_0322 1.159 0.70
0186_0189 1.157 0.70
0133_0139 1.156 0.70
0168_0178 1.150 0.69
0308_0312 1.148 0.69
0313_0317 1.146 0.69
0181_0185 1.137 0.68
0111_0114 1.136 0.68
0181_0184 1.133 0.67
0288_0313 1.125 0.67
0066_0205 1.124 0.66
0116_0124 1.117 0.66
0166_0216 1.117 0.66
0158_0186 1.113 0.65
0259_0311 1.111 0.65
0050_0082 1.103 0.64
0179_0183 1.102 0.64
0264_0294 1.097 0.64
0166_0210 1.089 0.63
0113_0155 1.086 0.63
0117_0159 1.078 0.62
0135_0167 1.078 0.62
0007_0084 1.077 0.62
0228_0240 1.070 0.61
0054_0086 1.055 0.59
0017_0262 1.055 0.59
0307_0311 1.054 0.59
0019_0097 1.053 0.59
0114_0144 1.051 0.59
0020_0165 1.050 0.59
0136_0150 1.048 0.58
0100_0143 1.048 0.58
0023_0267 1.046 0.58
0134_0157 1.042 0.58
0082_0089 1.042 0.58
0152_0156 1.041 0.58
0113_0117 1.039 0.57
0075_0094 1.039 0.57
0059_0292 1.038 0.57
0170_0199 1.035 0.57
0080_0129 1.034 0.57
0135_0196 1.032 0.57
0065_0111 1.030 0.56
0205_0214 1.026 0.56
0037_0271 1.026 0.56
0091_0163 1.026 0.56
0091_0132 1.021 0.55
0067_0135 1.014 0.55
0220_0227 1.012 0.54
0117_0160 1.012 0.54
0023_0167 1.009 0.54
0066_0162 1.008 0.54
0098_0169 1.008 0.54
0098_0220 1.007 0.54
0200_0206 1.007 0.54
0176_0180 1.006 0.54
0117_0156 1.003 0.53
0220_0228 1.003 0.53
0180_0212 1.002 0.53
0259_0305 1.001 0.53
0254_0311 1.000 0.53
0004_0130 0.999 0.53
0133_0165 0.997 0.53
0066_0287 0.994 0.52
0248_0255 0.993 0.52
0299_0316 0.993 0.52
0098_0266 0.986 0.52
0090_0317 0.985 0.51
0127_0157 0.984 0.51
0261_0319 0.984 0.51
0007_0299 0.981 0.51
0068_0097 0.978 0.51
0084_0118 0.977 0.51
0220_0270 0.977 0.51
0311_0314 0.972 0.50
0053_0064 0.970 0.50
0135_0273 0.970 0.50
0097_0146 0.969 0.50
0220_0226 0.969 0.50
0125_0128 0.967 0.49
0025_0078 0.965 0.49
0158_0185 0.963 0.49
0184_0260 0.959 0.49
0067_0165 0.958 0.48
0054_0058 0.957 0.48
0318_0321 0.956 0.48
0256_0264 0.955 0.48
0104_0107 0.954 0.48
0078_0216 0.954 0.48
0007_0130 0.953 0.48
0094_0116 0.950 0.48
0146_0177 0.950 0.48
0199_0270 0.949 0.47
0175_0201 0.947 0.47
0170_0220 0.946 0.47
0285_0289 0.946 0.47
0168_0201 0.945 0.47
0165_0217 0.944 0.47
0168_0194 0.944 0.47
0314_0318 0.943 0.47
0024_0316 0.942 0.47
0097_0267 0.941 0.47
0195_0246 0.940 0.46
0135_0146 0.939 0.46
0138_0171 0.938 0.46
0052_0290 0.938 0.46
0042_0081 0.936 0.46
0209_0212 0.932 0.46
0175_0194 0.931 0.45
0178_0194 0.931 0.45
0263_0308 0.929 0.45
0062_0089 0.929 0.45
0081_0084 0.926 0.45
0061_0295 0.925 0.45
0022_0265 0.925 0.45
0074_0257 0.925 0.45
0163_0323 0.924 0.45
0061_0088 0.924 0.45
0076_0115 0.923 0.45
0287_0290 0.923 0.45
0254_0262 0.922 0.44
0076_0079 0.920 0.44
0098_0170 0.919 0.44
0198_0220 0.919 0.44
0259_0262 0.919 0.44
0179_0194 0.915 0.44
0159_0247 0.914 0.44
0150_0166 0.914 0.44
0063_0254 0.913 0.43
0251_0255 0.913 0.43
0058_0248 0.908 0.43
0179_0205 0.907 0.43
0320_0326 0.907 0.43
0165_0323 0.907 0.43
0025_0209 0.906 0.43
0157_0176 0.906 0.43
0075_0116 0.904 0.42
0290_0293 0.896 0.42
0314_0319 0.895 0.41
0010_0154 0.892 0.41
0203_0318 0.891 0.41
0065_0307 0.887 0.41
0226_0293 0.887 0.41
0072_0135 0.887 0.41
0051_0215 0.885 0.40
0174_0177 0.885 0.40
0098_0137 0.885 0.40
0151_0155 0.885 0.40
0257_0261 0.884 0.40
0183_0189 0.883 0.40
0084_0312 0.882 0.40
0020_0324 0.882 0.40
0120_0131 0.882 0.40
0259_0314 0.880 0.40
0027_0291 0.880 0.40
0072_0262 0.879 0.40
0263_0323 0.878 0.40
0021_0196 0.877 0.39
0058_0085 0.877 0.39
0015_0063 0.877 0.39
0012_0301 0.876 0.39
0222_0246 0.876 0.39
0183_0214 0.875 0.39
0266_0294 0.874 0.39
0188_0193 0.873 0.39
0264_0298 0.871 0.39
0086_0089 0.870 0.39
0019_0265 0.863 0.38
0278_0283 0.863 0.38
0122_0131 0.862 0.38
0246_0257 0.860 0.38
0199_0301 0.857 0.37
0199_0228 0.856 0.37
0019_0022 0.856 0.37
0175_0205 0.853 0.37
0260_0319 0.853 0.37
0114_0311 0.848 0.36
0291_0316 0.847 0.36
0176_0204 0.846 0.36
0032_0229 0.845 0.36
0251_0254 0.844 0.36
0080_0083 0.844 0.36
0278_0290 0.843 0.36
0003_0312 0.841 0.36
0098_0228 0.841 0.36
0098_0270 0.840 0.36
0139_0146 0.839 0.35
0210_0246 0.837 0.35
0318_0325 0.837 0.35
0144_0317 0.834 0.35
0073_0302 0.834 0.35
0136_0149 0.833 0.35
0091_0326 0.833 0.35
0198_0270 0.832 0.35
0083_0322 0.832 0.35
0039_0133 0.832 0.35
0300_0306 0.831 0.35
0080_0184 0.830 0.35
0093_0323 0.828 0.34
0186_0210 0.825 0.34
0138_0217 0.825 0.34
0090_0121 0.825 0.34
0182_0187 0.824 0.34
0195_0208 0.822 0.34
0110_0307 0.822 0.34
0079_0090 0.820 0.34
0182_0189 0.820 0.34
0017_0316 0.820 0.34
0055_0058 0.820 0.34
0026_0094 0.819 0.33
0069_0079 0.818 0.33
0116_0121 0.817 0.33
0049_0072 0.817 0.33
0318_0322 0.816 0.33
0187_0192 0.815 0.33
0222_0257 0.814 0.33
0222_0290 0.814 0.33
0254_0320 0.813 0.33
0226_0229 0.812 0.33
0113_0156 0.812 0.33
0147_0177 0.811 0.33
0146_0174 0.810 0.33
0131_0164 0.809 0.32
0313_0318 0.809 0.32
0207_0211 0.808 0.32
0277_0283 0.808 0.32
0138_0146 0.808 0.32
0250_0266 0.808 0.32
0137_0146 0.808 0.32
0156_0213 0.808 0.32
0180_0310 0.807 0.32
0050_0085 0.807 0.32
0166_0182 0.806 0.32
0321_0326 0.805 0.32
0018_0089 0.804 0.32
0024_0261 0.803 0.32
0053_0057 0.800 0.32
0224_0291 0.798 0.31
0077_0185 0.796 0.31
0260_0304 0.795 0.31
0055_0287 0.794 0.31
0175_0209 0.793 0.31
0061_0124 0.792 0.31
0010_0285 0.792 0.31
0116_0136 0.792 0.31
0010_0013 0.791 0.31
0319_0326 0.791 0.31
0157_0258 0.790 0.31
0071_0291 0.790 0.31
0220_0266 0.788 0.30
0028_0072 0.788 0.30
0141_0173 0.787 0.30
0146_0198 0.787 0.30
0208_0212 0.787 0.30
0068_0195 0.785 0.30
0135_0228 0.783 0.30
0053_0149 0.783 0.30
0095_0153 0.783 0.30
0054_0057 0.783 0.30
0052_0287 0.782 0.30
0199_0206 0.782 0.30
0078_0094 0.780 0.30
0138_0197 0.780 0.30
0091_0304 0.779 0.30
0154_0187 0.779 0.30
0068_0265 0.778 0.29
0306_0320 0.778 0.29
0222_0288 0.778 0.29
0139_0150 0.778 0.29
0079_0132 0.778 0.29
0063_0317 0.777 0.29
0022_0094 0.776 0.29
0006_0088 0.775 0.29
0072_0097 0.774 0.29
0210_0214 0.774 0.29
0171_0200 0.773 0.29
0159_0248 0.773 0.29
0091_0120 0.773 0.29
0022_0120 0.773 0.29
0084_0184 0.772 0.29
0248_0256 0.772 0.29
0018_0076 0.770 0.29
0140_0174 0.770 0.29
0107_0148 0.769 0.29
0224_0257 0.769 0.29
0008_0132 0.768 0.29
0216_0257 0.768 0.29
0169_0272 0.768 0.29
0122_0125 0.767 0.28
0164_0324 0.766 0.28
0227_0265 0.766 0.28
0054_0089 0.765 0.28
0198_0218 0.765 0.28
0022_0086 0.765 0.28
0091_0179 0.764 0.28
0021_0267 0.763 0.28
0022_0068 0.763 0.28
0129_0139 0.762 0.28
0164_0188 0.762 0.28
0187_0295 0.762 0.28
0224_0293 0.762 0.28
0171_0230 0.762 0.28
0112_0152 0.761 0.28
0285_0288 0.760 0.28
0063_0184 0.759 0.28
0176_0179 0.758 0.28
0173_0260 0.758 0.28
0169_0220 0.757 0.28
0230_0271 0.757 0.28
0134_0139 0.757 0.28
0200_0217 0.756 0.27
0248_0304 0.754 0.27
0157_0266 0.754 0.27
0116_0146 0.754 0.27
0117_0188 0.753 0.27
0199_0272 0.752 0.27
0017_0061 0.752 0.27
0138_0150 0.752 0.27
0091_0122 0.751 0.27
0307_0319 0.750 0.27
0007_0252 0.747 0.27
0114_0248 0.747 0.27
0179_0189 0.746 0.27
0162_0180 0.745 0.26
0030_0064 0.744 0.26
0071_0097 0.743 0.26
0205_0208 0.743 0.26
0130_0244 0.742 0.26
0137_0169 0.742 0.26
0166_0323 0.741 0.26
0105_0210 0.740 0.26
0051_0085 0.739 0.26
0092_0159 0.737 0.26
0063_0074 0.737 0.26
0192_0195 0.737 0.26
0165_0195 0.736 0.26
0248_0252 0.735 0.26
0143_0147 0.735 0.26
0158_0164 0.735 0.26
0138_0177 0.734 0.26
0263_0315 0.734 0.26
0152_0164 0.734 0.26
0064_0248 0.733 0.25
0054_0310 0.733 0.25
0180_0319 0.732 0.25
0018_0063 0.731 0.25
0019_0295 0.730 0.25
0093_0272 0.729 0.25
0197_0209 0.729 0.25
0056_0059 0.729 0.25
0218_0262 0.729 0.25
0006_0061 0.727 0.25
0166_0271 0.727 0.25
0214_0222 0.727 0.25
0263_0324 0.727 0.25
0072_0230 0.726 0.25
0273_0289 0.726 0.25
0080_0118 0.726 0.25
0018_0309 0.725 0.25
0195_0217 0.725 0.25
0004_0012 0.724 0.25
0062_0121 0.721 0.24
0246_0293 0.721 0.24
0016_0074 0.721 0.24
0110_0192 0.721 0.24
0143_0175 0.720 0.24
0194_0219 0.719 0.24
0092_0179 0.719 0.24
0100_0287 0.718 0.24
0064_0080 0.718 0.24
0077_0080 0.717 0.24
0112_0176 0.717 0.24
0131_0242 0.717 0.24
0147_0184 0.716 0.24
Local Interactions:
i_j Score Prob
0260_0261 3.637 1.00
0277_0278 2.517 1.00
0188_0189 2.446 1.00
0188_0190 2.405 1.00
0086_0087 2.335 1.00
0021_0023 2.140 0.99
0011_0012 1.849 0.98
0308_0310 1.829 0.98
0126_0127 1.687 0.96
0246_0247 1.619 0.95
0126_0128 1.601 0.94
0012_0013 1.543 0.93
0011_0013 1.487 0.91
0125_0126 1.472 0.90
0169_0171 1.406 0.88
0323_0324 1.357 0.85
0189_0190 1.339 0.84
0324_0325 1.337 0.84
0135_0137 1.251 0.78
0173_0174 1.245 0.77
0169_0170 1.214 0.75
0135_0136 1.184 0.72
0270_0272 1.136 0.68
0005_0006 1.051 0.59
0160_0161 1.040 0.58
0012_0014 1.035 0.57
0006_0008 1.031 0.57
0186_0187 1.028 0.56
0283_0284 1.010 0.54
0286_0288 1.009 0.54
0282_0283 0.999 0.53
0285_0287 0.998 0.53
0217_0218 0.989 0.52
0104_0105 0.981 0.51
0159_0160 0.970 0.50
0016_0018 0.961 0.49
0194_0195 0.961 0.49
0287_0288 0.947 0.47
0134_0136 0.946 0.47
0033_0034 0.914 0.44
0006_0007 0.907 0.43
0090_0091 0.901 0.42
0223_0224 0.898 0.42
0306_0308 0.881 0.40
0283_0285 0.881 0.40
0228_0230 0.880 0.40
0240_0242 0.873 0.39
0222_0224 0.869 0.39
0128_0129 0.865 0.38
0100_0101 0.855 0.37
0278_0280 0.841 0.36
0305_0306 0.837 0.35
0276_0278 0.836 0.35
0170_0171 0.830 0.35
0315_0316 0.827 0.34
0138_0140 0.824 0.34
0010_0011 0.822 0.34
0112_0113 0.818 0.33
0077_0078 0.806 0.32
0286_0287 0.797 0.31
0270_0271 0.788 0.30
0243_0245 0.786 0.30
0075_0076 0.781 0.30
0097_0098 0.779 0.30
0282_0284 0.777 0.29
0171_0172 0.766 0.28
0062_0063 0.764 0.28
0257_0258 0.763 0.28
0090_0092 0.763 0.28
0089_0091 0.759 0.28
0111_0112 0.757 0.28
0208_0210 0.756 0.27
0268_0270 0.752 0.27
0026_0027 0.750 0.27
0299_0300 0.744 0.26
0045_0046 0.733 0.25
0244_0245 0.730 0.25
0184_0185 0.727 0.25
0241_0242 0.727 0.25
0171_0173 0.723 0.25
0289_0290 0.723 0.25
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: A R I N T ...
Page generated in 0.133 seconds.