| UniProt: | P0A8F4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11701 | ||
| Length: | 213 (208) | ||
| Sequences: | 2294 | ||
| Seq/Len: | 11.03 |
| URK
Paralog alert: 0.67 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: URK YGGC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 83_A | 88_S | 5.234 | 1.00 | |
| 96_S | 103_M | 4.379 | 1.00 | |
| 49_Y | 80_H | 3.358 | 1.00 | |
| 57_S | 60_E | 2.633 | 1.00 | |
| 79_E | 83_A | 2.58 | 1.00 | |
| 129_R | 186_Y | 2.542 | 1.00 | |
| 76_L | 80_H | 2.479 | 1.00 | |
| 52_D | 55_H | 2.429 | 1.00 | |
| 12_G | 132_L | 2.308 | 1.00 | |
| 89_A | 108_T | 2.131 | 1.00 | |
| 142_L | 177_L | 2.125 | 1.00 | |
| 14_A | 123_L | 2.03 | 1.00 | |
| 73_D | 102_R | 1.975 | 1.00 | |
| 166_A | 170_K | 1.932 | 1.00 | |
| 91_D | 108_T | 1.931 | 1.00 | |
| 82_Q | 131_E | 1.896 | 1.00 | |
| 77_L | 117_L | 1.853 | 1.00 | |
| 85_K | 133_N | 1.847 | 1.00 | |
| 128_L | 132_L | 1.823 | 1.00 | |
| 173_R | 177_L | 1.811 | 1.00 | |
| 146_L | 169_Q | 1.805 | 1.00 | |
| 53_Q | 64_T | 1.776 | 1.00 | |
| 146_L | 165_M | 1.763 | 1.00 | |
| 96_S | 99_E | 1.746 | 1.00 | |
| 89_A | 110_E | 1.745 | 1.00 | |
| 160_S | 163_S | 1.731 | 1.00 | |
| 46_E | 122_L | 1.709 | 1.00 | |
| 202_D | 206_A | 1.667 | 1.00 | |
| 91_D | 106_T | 1.63 | 1.00 | |
| 16_A | 145_C | 1.622 | 1.00 | |
| 117_L | 132_L | 1.614 | 1.00 | |
| 31_E | 34_E | 1.567 | 1.00 | |
| 92_L | 107_V | 1.508 | 1.00 | |
| 203_I | 207_K | 1.486 | 1.00 | |
| 11_I | 114_V | 1.47 | 1.00 | |
| 40_H | 113_K | 1.442 | 1.00 | |
| 205_K | 209_S | 1.434 | 1.00 | |
| 146_L | 150_I | 1.401 | 0.99 | |
| 13_I | 24_I | 1.4 | 0.99 | |
| 139_D | 184_K | 1.389 | 0.99 | |
| 126_A | 130_D | 1.346 | 0.99 | |
| 10_I | 85_K | 1.317 | 0.99 | |
| 46_E | 74_H | 1.313 | 0.99 | |
| 80_H | 83_A | 1.311 | 0.99 | |
| 205_K | 210_Q | 1.304 | 0.99 | |
| 184_K | 190_I | 1.261 | 0.99 | |
| 123_L | 135_S | 1.245 | 0.98 | |
| 63_K | 70_S | 1.235 | 0.98 | |
| 202_D | 207_K | 1.217 | 0.98 | |
| 136_I | 204_L | 1.213 | 0.98 | |
| 83_A | 86_R | 1.208 | 0.98 | |
| 78_L | 82_Q | 1.206 | 0.98 | |
| 50_Y | 72_M | 1.204 | 0.98 | |
| 58_M | 62_V | 1.201 | 0.98 | |
| 17_S | 176_F | 1.199 | 0.98 | |
| 15_G | 20_G | 1.198 | 0.98 | |
| 15_G | 19_S | 1.193 | 0.98 | |
| 147_M | 151_K | 1.187 | 0.98 | |
| 54_S | 101_T | 1.185 | 0.98 | |
| 53_Q | 66_Y | 1.173 | 0.98 | |
| 144_I | 147_M | 1.155 | 0.97 | |
| 10_I | 132_L | 1.146 | 0.97 | |
| 151_K | 155_N | 1.134 | 0.97 | |
| 57_S | 61_R | 1.134 | 0.97 | |
| 154_V | 164_V | 1.133 | 0.97 | |
| 82_Q | 86_R | 1.126 | 0.97 | |
| 206_A | 210_Q | 1.121 | 0.97 | |
| 146_L | 173_R | 1.116 | 0.96 | |
| 167_Q | 172_V | 1.107 | 0.96 | |
| 172_V | 175_M | 1.105 | 0.96 | |
| 95_Y | 100_H | 1.104 | 0.96 | |
| 207_K | 210_Q | 1.104 | 0.96 | |
| 142_L | 145_C | 1.103 | 0.96 | |
| 203_I | 210_Q | 1.097 | 0.96 | |
| 24_I | 138_V | 1.09 | 0.96 | |
| 48_C | 92_L | 1.09 | 0.96 | |
| 135_S | 188_D | 1.088 | 0.96 | |
| 89_A | 111_P | 1.088 | 0.96 | |
| 52_D | 101_T | 1.078 | 0.95 | |
| 9_V | 134_F | 1.069 | 0.95 | |
| 97_Y | 100_H | 1.069 | 0.95 | |
| 153_D | 157_R | 1.052 | 0.95 | |
| 123_L | 187_A | 1.047 | 0.94 | |
| 68_H | 179_F | 1.038 | 0.94 | |
| 50_Y | 67_D | 1.038 | 0.94 | |
| 99_E | 103_M | 1.028 | 0.94 | |
| 145_C | 176_F | 1.028 | 0.94 | |
| 33_R | 116_I | 1.026 | 0.94 | |
| 53_Q | 100_H | 1.022 | 0.93 | |
| 45_P | 48_C | 1.022 | 0.93 | |
| 172_V | 176_F | 1.019 | 0.93 | |
| 141_P | 144_I | 1.017 | 0.93 | |
| 94_V | 103_M | 1.017 | 0.93 | |
| 78_L | 127_R | 1.014 | 0.93 | |
| 81_L | 117_L | 1.005 | 0.93 | |
| 78_L | 128_L | 1.003 | 0.93 | |
| 199_I | 203_I | 1.003 | 0.93 | |
| 208_I | 212_F | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2jeoA | 1 | 0.9765 | 100 | 0.431 | Contact Map | 0.767 |
| 2ga8A | 1 | 0.939 | 100 | 0.441 | Contact Map | 0.618 |
| 3tqcA | 2 | 0.9437 | 100 | 0.452 | Contact Map | 0.777 |
| 1a7jA | 1 | 0.9624 | 100 | 0.472 | Contact Map | 0.523 |
| 4bfzA | 2 | 0.9437 | 100 | 0.504 | Contact Map | 0.791 |
| 3aszA | 2 | 0.9671 | 100 | 0.506 | Contact Map | 0.785 |
| 1uj2A | 2 | 0.9812 | 100 | 0.51 | Contact Map | 0.793 |
| 1rz3A | 1 | 0.8451 | 99.9 | 0.523 | Contact Map | 0.633 |
| 4gi7A | 8 | 0.939 | 99.9 | 0.56 | Contact Map | 0.817 |
| 2qt1A | 1 | 0.9014 | 99.9 | 0.561 | Contact Map | 0.639 |
Sequence Conservation (Image Generated using WebLogo v3)