May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATOA - ATOB
UniProt: P76459 - P76461
Length: 610
Sequences: 569
Seq/Len: 0.94
I_Prob: 0.00

ATOA - Acetate CoA-transferase subunit beta
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ATOA
ATOB - Acetyl-CoA acetyltransferase
Paralog alert: 0.73 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ATOB FADA FADI PAAJ YQEF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
132_S 218_E 0.97 0.00
205_V 305_G 0.92 0.00
135_V 300_A 0.89 0.00
78_M 247_A 0.88 0.00
41_I 196_F 0.87 0.00
161_Q 225_T 0.82 0.00
27_L 214_F 0.82 0.00
35_L 36_A 0.82 0.00
147_S 221_K 0.81 0.00
4_K 368_A 0.81 0.00
100_G 36_A 0.80 0.00
194_T 13_A 0.78 0.00
167_L 377_T 0.76 0.00
97_V 324_F 0.75 0.00
148_A 268_A 0.75 0.00
198_K 169_Y 0.74 0.00
170_E 221_K 0.74 0.00
174_F 179_L 0.74 0.00
77_A 14_I 0.73 0.00
93_I 334_D 0.73 0.00
169_T 259_I 0.72 0.00
27_L 180_A 0.71 0.00
102_Q 141_Y 0.71 0.00
191_D 37_A 0.69 0.00
80_D 71_L 0.69 0.00
175_R 8_S 0.69 0.00
35_L 275_R 0.68 0.00
93_I 91_G 0.68 0.00
145_D 119_S 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1683 seconds.