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OPENSEQ.org

RL22 - RPOA
UniProt: P61175 - P0A7Z4
Length: 439
Sequences: 404
Seq/Len: 0.93
I_Prob: 0.00

RL22 - 50S ribosomal protein L22
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL22
RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_K 184_A 1.39 0.00
47_V 21_S 1.34 0.00
77_D 289_L 1.31 0.00
88_R 260_L 1.28 0.00
56_A 66_H 1.23 0.00
83_K 114_D 1.22 0.00
82_M 138_A 1.18 0.00
23_L 177_Y 1.18 0.00
105_V 325_S 1.15 0.00
40_N 121_V 1.14 0.00
49_K 30_P 1.12 0.00
11_R 260_L 1.10 0.00
8_R 132_H 1.10 0.00
41_K 280_D 1.09 0.00
70_K 108_G 1.08 0.00
93_A 74_V 1.08 0.00
101_S 10_K 1.07 0.00
9_H 156_S 1.07 0.00
59_E 199_D 1.07 0.00
90_K 303_I 1.06 0.00
98_K 143_R 1.06 0.00
82_M 123_I 1.06 0.00
77_D 31_L 1.05 0.00
32_A 299_S 1.05 0.00
8_R 188_E 1.04 0.00
64_A 234_L 1.04 0.00
99_R 297_K 1.04 0.00
11_R 110_V 1.03 0.00
33_L 224_L 1.02 0.00
7_H 48_L 1.02 0.00
31_Q 247_P 1.02 0.00
105_V 87_G 1.02 0.00
76_V 231_F 1.01 0.00
4_I 183_I 1.01 0.00
98_K 83_L 1.01 0.00
28_K 177_Y 1.00 0.00
80_P 291_K 0.99 0.00
27_K 2_Q 0.98 0.00
99_R 263_T 0.98 0.00
107_V 138_A 0.97 0.00
58_A 285_T 0.97 0.00
106_V 140_I 0.97 0.00
81_S 75_Q 0.97 0.00
105_V 112_A 0.97 0.00
40_N 177_Y 0.96 0.00
2_E 127_Q 0.96 0.00
87_P 124_V 0.95 0.00
84_R 296_G 0.95 0.00
99_R 196_T 0.95 0.00
39_T 47_L 0.94 0.00
77_D 275_I 0.94 0.00
86_M 210_T 0.94 0.00
30_S 103_N 0.94 0.00
1_M 131_C 0.94 0.00
38_Y 17_E 0.94 0.00
4_I 27_T 0.94 0.00
40_N 115_I 0.94 0.00
80_P 205_M 0.93 0.00
26_G 108_G 0.92 0.00
23_L 173_V 0.92 0.00
79_G 59_V 0.92 0.00
69_L 149_G 0.92 0.00
93_A 31_L 0.91 0.00
79_G 294_N 0.91 0.00
99_R 192_V 0.91 0.00
79_G 291_K 0.91 0.00
101_S 14_V 0.91 0.00
47_V 24_A 0.90 0.00
47_V 185_Y 0.90 0.00
101_S 167_P 0.90 0.00
15_Q 59_V 0.90 0.00
107_V 234_L 0.90 0.00
80_P 180_V 0.90 0.00
32_A 296_G 0.89 0.00
70_K 149_G 0.89 0.00
7_H 160_H 0.89 0.00
71_V 101_T 0.89 0.00
24_I 324_A 0.88 0.00
15_Q 158_R 0.88 0.00
86_M 111_T 0.88 0.00
92_R 80_E 0.88 0.00
68_D 136_E 0.88 0.00
19_L 227_Q 0.87 0.00
28_K 185_Y 0.87 0.00
58_A 303_I 0.87 0.00
14_A 182_R 0.87 0.00
71_V 240_P 0.87 0.00
58_A 199_D 0.87 0.00
37_T 24_A 0.87 0.00
80_P 171_L 0.87 0.00
49_K 27_T 0.86 0.00
44_A 283_Q 0.86 0.00
85_I 260_L 0.86 0.00
108_S 96_D 0.86 0.00
77_D 155_A 0.86 0.00
30_S 318_L 0.86 0.00
95_R 56_V 0.86 0.00
49_K 284_R 0.86 0.00
3_T 168_I 0.85 0.00
68_D 64_V 0.85 0.00
37_T 26_V 0.85 0.00
75_F 138_A 0.85 0.00
71_V 226_E 0.85 0.00
49_K 285_T 0.85 0.00
105_V 140_I 0.85 0.00
42_K 173_V 0.84 0.00
48_K 278_I 0.84 0.00
29_V 227_Q 0.83 0.00
90_K 295_L 0.83 0.00
106_V 165_E 0.83 0.00
47_V 132_H 0.83 0.00
53_S 207_T 0.83 0.00
28_K 113_A 0.83 0.00
42_K 212_D 0.82 0.00
82_M 96_D 0.82 0.00
38_Y 107_I 0.82 0.00
59_E 33_R 0.82 0.00
74_I 180_V 0.82 0.00
68_D 189_A 0.82 0.00
101_S 310_R 0.82 0.00
33_L 177_Y 0.82 0.00
31_Q 144_I 0.82 0.00
69_L 64_V 0.82 0.00
87_P 95_K 0.82 0.00
76_V 304_K 0.81 0.00
97_L 211_I 0.81 0.00
103_I 204_E 0.81 0.00
39_T 100_L 0.81 0.00
63_G 172_L 0.81 0.00
59_E 43_L 0.81 0.00
12_S 26_V 0.81 0.00
81_S 78_I 0.81 0.00
13_S 95_K 0.81 0.00
107_V 120_D 0.81 0.00
19_L 125_K 0.81 0.00
54_A 66_H 0.81 0.00
105_V 214_E 0.81 0.00
30_S 8_F 0.81 0.00
17_V 79_L 0.81 0.00
89_A 303_I 0.80 0.00
60_H 108_G 0.80 0.00
20_V 265_R 0.80 0.00
25_R 280_D 0.80 0.00
13_S 280_D 0.80 0.00
59_E 191_R 0.80 0.00
85_I 185_Y 0.80 0.00
86_M 17_E 0.79 0.00
1_M 144_I 0.79 0.00
38_Y 181_E 0.79 0.00
81_S 149_G 0.79 0.00
17_V 254_L 0.79 0.00
104_T 111_T 0.79 0.00
85_I 304_K 0.79 0.00
23_L 211_I 0.79 0.00
78_E 143_R 0.79 0.00
8_R 187_V 0.79 0.00
92_R 152_Y 0.78 0.00
90_K 208_N 0.78 0.00
28_K 189_A 0.78 0.00
80_P 225_A 0.78 0.00
75_F 133_L 0.78 0.00
2_E 173_V 0.78 0.00
8_R 246_K 0.78 0.00
65_D 183_I 0.78 0.00
7_H 149_G 0.78 0.00
33_L 142_M 0.78 0.00
60_H 276_H 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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