May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

HIS5 - YCIO
UniProt: P60595 - P0AFR4
Length: 402
Sequences: 291
Seq/Len: 0.75
I_Prob: 0.00

HIS5 - Imidazole glycerol phosphate synthase subunit HisH
Paralog alert: 0.89 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: HIS5 PABA
YCIO - Uncharacterized protein YciO
Paralog alert: 0.53 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RIMN YCIO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
132_G 185_I 1.26 0.00
191_K 73_S 1.24 0.00
6_L 167_Q 1.22 0.00
68_A 203_K 1.21 0.00
103_V 25_R 1.21 0.00
189_L 171_I 1.19 0.00
4_V 190_D 1.13 0.00
86_R 59_L 1.05 0.00
132_G 48_N 1.05 0.00
20_I 172_I 1.05 0.00
6_L 155_S 1.01 0.00
128_R 24_V 0.99 0.00
194_L 96_N 0.98 0.00
4_V 24_V 0.97 0.00
172_F 134_E 0.95 0.00
66_I 194_V 0.94 0.00
73_V 51_E 0.92 0.00
73_V 58_Q 0.92 0.00
35_V 75_L 0.91 0.00
29_V 22_E 0.91 0.00
23_H 101_L 0.91 0.00
70_T 195_V 0.90 0.00
193_F 59_L 0.89 0.00
26_E 121_M 0.87 0.00
19_A 109_R 0.86 0.00
5_I 102_K 0.86 0.00
134_E 135_A 0.86 0.00
163_F 107_V 0.84 0.00
147_M 132_L 0.84 0.00
36_V 119_I 0.83 0.00
71_Q 197_E 0.83 0.00
158_N 88_L 0.82 0.00
165_A 115_K 0.82 0.00
107_T 30_I 0.82 0.00
4_V 194_V 0.81 0.00
30_S 56_I 0.81 0.00
130_F 65_F 0.81 0.00
30_S 53_I 0.81 0.00
83_L 197_E 0.81 0.00
83_L 170_L 0.80 0.00
154_I 192_P 0.80 0.00
132_G 189_D 0.80 0.00
105_K 46_D 0.80 0.00
4_V 53_I 0.80 0.00
189_L 183_T 0.80 0.00
166_A 70_R 0.80 0.00
23_H 80_F 0.80 0.00
73_V 40_L 0.80 0.00
80_M 6_Y 0.79 0.00
157_C 149_G 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3097 seconds.