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OPENSEQ.org

FLIJ - FLIQ
UniProt: P52613 - P0AC07
Length: 236
Sequences: 193
Seq/Len: 0.82
I_Prob: 0.01

FLIJ - Flagellar FliJ protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIJ
FLIQ - Flagellar biosynthetic protein FliQ
Paralog alert: 0.34 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_L 12_E 1.53 0.01
49_Y 41_A 1.40 0.01
42_L 88_I 1.39 0.01
7_L 59_F 1.34 0.01
122_A 75_D 1.30 0.01
48_E 55_I 1.29 0.01
54_N 88_I 1.28 0.01
16_K 34_I 1.27 0.01
110_A 38_L 1.26 0.00
37_E 30_V 1.25 0.00
40_K 20_L 1.24 0.00
69_Y 49_L 1.23 0.00
23_R 35_I 1.23 0.00
57_M 7_M 1.20 0.00
17_E 37_I 1.18 0.00
83_H 55_I 1.18 0.00
82_Q 89_G 1.17 0.00
4_H 73_L 1.17 0.00
130_D 57_A 1.17 0.00
112_Q 12_E 1.16 0.00
49_Y 3_P 1.15 0.00
110_A 55_I 1.14 0.00
124_L 19_A 1.14 0.00
46_Q 62_I 1.14 0.00
44_D 87_I 1.12 0.00
118_Q 61_A 1.12 0.00
21_A 49_L 1.11 0.00
79_A 65_A 1.11 0.00
75_T 52_I 1.11 0.00
29_R 87_I 1.09 0.00
102_R 56_I 1.08 0.00
42_L 70_L 1.07 0.00
123_L 35_I 1.07 0.00
114_L 26_L 1.06 0.00
88_N 13_A 1.06 0.00
12_D 30_V 1.05 0.00
42_L 65_A 1.05 0.00
21_A 2_T 1.05 0.00
107_R 8_M 1.04 0.00
7_L 11_T 1.04 0.00
34_Q 77_V 1.04 0.00
47_N 61_A 1.03 0.00
38_Q 18_L 1.03 0.00
52_N 86_Y 1.03 0.00
92_Q 35_I 1.02 0.00
22_A 73_L 1.01 0.00
15_E 60_I 1.01 0.00
69_Y 72_L 1.01 0.00
130_D 76_Y 1.00 0.00
18_V 54_K 1.00 0.00
107_R 66_G 1.00 0.00
90_W 55_I 1.00 0.00
129_L 68_W 0.99 0.00
110_A 88_I 0.99 0.00
20_D 73_L 0.99 0.00
29_R 84_L 0.99 0.00
76_L 24_L 0.98 0.00
58_S 16_V 0.98 0.00
101_W 41_A 0.97 0.00
94_V 56_I 0.97 0.00
70_Q 87_I 0.95 0.00
103_E 59_F 0.95 0.00
82_Q 70_L 0.95 0.00
89_Q 75_D 0.95 0.00
44_D 72_L 0.94 0.00
42_L 89_G 0.94 0.00
131_Q 85_P 0.94 0.00
33_Q 64_I 0.93 0.00
55_S 16_V 0.92 0.00
84_R 65_A 0.91 0.00
18_V 27_V 0.91 0.00
93_K 63_I 0.91 0.00
18_V 61_A 0.91 0.00
9_T 6_V 0.90 0.00
12_D 78_R 0.90 0.00
15_E 86_Y 0.90 0.00
106_Q 25_L 0.90 0.00
122_A 71_N 0.89 0.00
117_R 43_Q 0.89 0.00
40_K 35_I 0.88 0.00
98_L 37_I 0.88 0.00
95_D 88_I 0.88 0.00
62_T 26_L 0.88 0.00
106_Q 12_E 0.88 0.00
68_N 81_F 0.87 0.00
119_S 79_T 0.87 0.00
36_E 71_N 0.87 0.00
68_N 22_A 0.87 0.00
133_K 62_I 0.86 0.00
68_N 43_Q 0.86 0.00
80_I 17_A 0.85 0.00
91_T 13_A 0.85 0.00
78_K 69_M 0.84 0.00
94_V 61_A 0.84 0.00
60_G 28_A 0.84 0.00
13_L 75_D 0.84 0.00
122_A 16_V 0.84 0.00
65_R 25_L 0.84 0.00
126_E 44_I 0.84 0.00
40_K 72_L 0.83 0.00
63_S 75_D 0.83 0.00
108_L 31_T 0.83 0.00
129_L 56_I 0.83 0.00
45_Y 13_A 0.83 0.00
63_S 76_Y 0.83 0.00
2_A 31_T 0.83 0.00
38_Q 77_V 0.83 0.00
57_M 52_I 0.83 0.00
10_L 37_I 0.83 0.00
75_T 17_A 0.83 0.00
100_S 34_I 0.83 0.00
11_K 16_V 0.83 0.00
1_M 28_A 0.83 0.00
130_D 21_A 0.82 0.00
66_W 80_L 0.82 0.00
68_N 18_L 0.82 0.00
32_C 75_D 0.82 0.00
46_Q 73_L 0.82 0.00
101_W 50_S 0.81 0.00
10_L 18_L 0.81 0.00
18_V 52_I 0.81 0.00
62_T 20_L 0.81 0.00
77_E 45_N 0.81 0.00
15_E 9_M 0.81 0.00
91_T 64_I 0.81 0.00
64_N 34_I 0.81 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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