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OPENSEQ.org
PTPC2 - PTPD
UniProt: P42905 - P42911
Length: 396
Sequences: 614
Seq/Len: 1.57
I_Prob: 0.98
PTPC2 - Putative N-acetylgalactosamine permease IIC component 2
Paralog alert: 0.85 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: PTPC2 		PTPD - N-acetylgalactosamine permease IID component
Paralog alert: 0.75 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: PTND PTPD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_V 122_C 2.26 0.98
129_N 58_K 2.17 0.97
125_D 28_R 2.09 0.96
122_S 27_E 1.78 0.89
124_C 32_G 1.74 0.87
124_C 61_L 1.44 0.69
103_A 71_V 1.35 0.61
78_T 26_Y 1.31 0.57
128_T 57_M 1.29 0.55
55_T 127_S 1.23 0.49
128_T 54_S 1.22 0.47
103_A 17_S 1.15 0.40
9_F 179_I 1.13 0.38
4_S 217_D 1.09 0.34
11_L 223_I 1.07 0.31
98_V 109_I 1.05 0.30
54_G 126_A 1.03 0.28
128_T 61_L 1.02 0.27
8_A 173_I 1.01 0.26
50_I 42_L 1.00 0.25
80_V 246_L 0.99 0.24
13_I 205_N 0.99 0.24
97_G 262_I 0.97 0.22
82_T 217_D 0.96 0.22
86_I 64_I 0.95 0.21
38_L 139_A 0.94 0.20
68_G 151_W 0.94 0.20
17_I 186_G 0.93 0.19
78_T 254_S 0.93 0.19
96_V 58_K 0.93 0.19
86_I 261_G 0.92 0.19
9_F 248_G 0.92 0.18
31_R 115_L 0.91 0.17
79_I 223_I 0.90 0.17
70_Q 64_I 0.89 0.16
89_G 51_P 0.89 0.16
28_H 115_L 0.89 0.16
29_M 67_H 0.89 0.16
41_L 12_R 0.89 0.16
108_M 81_M 0.88 0.15
45_D 38_M 0.87 0.15
93_D 48_D 0.86 0.14
104_V 236_L 0.85 0.14
71_P 192_Y 0.85 0.14
58_L 127_S 0.85 0.14
81_G 183_T 0.85 0.13
47_H 90_T 0.84 0.13
95_A 44_K 0.84 0.13
11_L 7_K 0.82 0.12
100_V 157_S 0.82 0.12
79_I 220_F 0.81 0.12
127_A 85_G 0.81 0.11
71_P 72_G 0.81 0.11
4_S 256_V 0.81 0.11
20_L 139_A 0.81 0.11
11_L 92_K 0.80 0.11
93_D 231_L 0.80 0.11
51_L 130_N 0.80 0.11
9_F 51_P 0.80 0.11
97_G 164_D 0.80 0.11
123_R 175_R 0.80 0.11
66_L 110_F 0.79 0.10
96_V 64_I 0.79 0.10
51_L 226_M 0.79 0.10
58_L 27_E 0.79 0.10
37_P 131_L 0.79 0.10
103_A 171_Q 0.78 0.10
10_A 214_D 0.78 0.10
50_I 225_P 0.78 0.10
54_G 123_S 0.78 0.10
11_L 96_V 0.78 0.10
6_L 194_H 0.78 0.10
51_L 230_L 0.78 0.10
50_I 128_Q 0.77 0.10
108_M 105_I 0.77 0.10
13_I 143_L 0.77 0.09
34_V 74_L 0.77 0.09
93_D 200_S 0.77 0.09
91_K 139_A 0.77 0.09
89_G 143_L 0.76 0.09
26_L 72_G 0.76 0.09
103_A 258_S 0.76 0.09
129_N 184_V 0.76 0.09
79_I 38_M 0.76 0.09
62_G 182_I 0.76 0.09
120_V 217_D 0.76 0.09
111_T 74_L 0.75 0.09
59_V 63_F 0.75 0.09
67_A 103_A 0.75 0.08
23_F 13_L 0.75 0.08
72_P 184_V 0.75 0.08
91_K 11_T 0.75 0.08
9_F 195_I 0.74 0.08
37_P 138_F 0.74 0.08
89_G 205_N 0.74 0.08
51_L 231_L 0.74 0.08
113_L 64_I 0.74 0.08
33_V 119_A 0.74 0.08
51_L 259_A 0.74 0.08
67_A 98_L 0.74 0.08
127_A 180_L 0.73 0.08
33_V 89_D 0.73 0.08
49_G 172_M 0.73 0.08
58_L 190_A 0.73 0.08
9_F 48_D 0.73 0.08
94_V 38_M 0.72 0.07
95_A 180_L 0.72 0.07
58_L 124_S 0.72 0.07
128_T 43_K 0.72 0.07
33_V 172_M 0.72 0.07
68_G 83_E 0.72 0.07
81_G 204_D 0.72 0.07
33_V 105_I 0.72 0.07
120_V 127_S 0.72 0.07
33_V 133_G 0.72 0.07
85_A 105_I 0.72 0.07
49_G 137_F 0.72 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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