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OPENSEQ.org
HOLA - IOJAP
UniProt: P28630 - P0AAT6
Length: 448
Sequences: 330
Seq/Len: 0.75
I_Prob: 0.08
HOLA - DNA polymerase III subunit delta
Paralog alert: 0.85 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: HOLA 		IOJAP - Ribosomal silencing factor RsfS
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IOJAP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
224_G 46_R 1.74 0.08
130_L 89_V 1.55 0.05
198_T 29_G 1.42 0.03
76_S 25_L 1.38 0.03
322_A 33_I 1.34 0.03
41_V 21_D 1.29 0.02
23_L 89_V 1.26 0.02
159_N 15_D 1.24 0.02
19_A 97_L 1.24 0.02
95_E 75_A 1.24 0.02
205_A 34_T 1.23 0.02
283_R 37_M 1.21 0.02
110_L 97_L 1.20 0.02
85_P 39_I 1.15 0.01
235_Q 91_Q 1.15 0.01
321_W 19_G 1.14 0.01
111_I 64_L 1.13 0.01
246_L 87_V 1.12 0.01
250_L 39_I 1.12 0.01
26_N 34_T 1.11 0.01
64_I 55_V 1.10 0.01
32_Q 45_S 1.09 0.01
197_L 97_L 1.08 0.01
231_H 38_I 1.08 0.01
319_S 11_I 1.08 0.01
236_L 44_S 1.08 0.01
42_A 87_V 1.08 0.01
273_F 37_M 1.07 0.01
38_V 50_S 1.07 0.01
298_L 16_D 1.07 0.01
310_L 53_D 1.06 0.01
109_L 54_H 1.06 0.01
267_T 25_L 1.06 0.01
188_L 74_S 1.06 0.01
161_E 29_G 1.05 0.01
79_T 83_G 1.05 0.01
215_F 51_I 1.05 0.01
271_A 34_T 1.04 0.01
267_T 60_R 1.04 0.01
298_L 61_A 1.03 0.01
50_H 90_M 1.02 0.01
180_A 44_S 1.02 0.01
23_L 28_Q 1.01 0.01
72_S 90_M 1.01 0.01
256_L 40_C 1.01 0.01
8_Q 80_V 1.01 0.01
127_F 75_A 1.00 0.01
64_I 20_Q 1.00 0.01
156_K 38_I 1.00 0.01
127_F 25_L 1.00 0.01
56_D 69_V 1.00 0.01
118_S 13_K 1.00 0.01
97_L 69_V 1.00 0.01
75_A 21_D 0.99 0.01
291_N 21_D 0.99 0.01
210_A 70_E 0.99 0.01
296_T 33_I 0.98 0.01
23_L 26_D 0.98 0.01
219_D 51_I 0.98 0.01
215_F 55_V 0.98 0.01
130_L 25_L 0.98 0.01
95_E 61_A 0.97 0.01
119_K 11_I 0.97 0.01
80_L 20_Q 0.97 0.01
167_N 58_E 0.96 0.01
135_V 38_I 0.96 0.01
237_R 34_T 0.96 0.01
157_Q 45_S 0.96 0.01
294_S 100_L 0.96 0.01
112_V 26_D 0.96 0.01
111_I 82_L 0.95 0.01
23_L 86_I 0.95 0.01
6_P 33_I 0.95 0.01
242_E 59_S 0.95 0.01
112_V 100_L 0.94 0.01
217_W 59_S 0.94 0.01
272_L 80_V 0.94 0.01
137_V 38_I 0.94 0.01
141_T 50_S 0.93 0.01
139_C 34_T 0.93 0.01
311_T 50_S 0.93 0.01
199_L 86_I 0.93 0.01
74_F 100_L 0.93 0.01
81_L 94_S 0.93 0.01
323_E 46_R 0.92 0.01
273_F 94_S 0.92 0.01
3_R 59_S 0.92 0.01
290_L 101_E 0.92 0.01
279_W 19_G 0.92 0.01
50_H 78_I 0.92 0.01
67_L 19_G 0.91 0.01
157_Q 38_I 0.91 0.01
308_T 85_V 0.91 0.01
312_L 19_G 0.91 0.01
114_G 40_C 0.91 0.01
20_A 33_I 0.91 0.01
145_A 26_D 0.91 0.01
175_E 76_D 0.91 0.01
172_Y 97_L 0.91 0.01
31_L 101_E 0.91 0.01
183_Q 90_M 0.90 0.01
70_A 11_I 0.90 0.01
291_N 8_D 0.90 0.01
106_D 97_L 0.90 0.01
242_E 83_G 0.90 0.01
162_L 49_M 0.90 0.01
254_L 67_L 0.90 0.01
249_T 27_V 0.89 0.01
248_R 79_V 0.89 0.01
255_L 50_S 0.89 0.01
27_D 53_D 0.89 0.01
157_Q 89_V 0.89 0.01
102_G 36_C 0.89 0.01
258_V 27_V 0.89 0.01
37_A 87_V 0.89 0.01
219_D 25_L 0.88 0.01
217_W 31_S 0.88 0.01
214_P 33_I 0.88 0.01
209_A 99_E 0.88 0.01
327_L 43_T 0.88 0.01
62_N 35_D 0.88 0.01
69_Q 44_S 0.88 0.01
301_A 52_A 0.88 0.01
199_L 89_V 0.88 0.01
33_E 28_Q 0.88 0.01
255_L 13_K 0.88 0.01
83_L 99_E 0.88 0.01
309_E 79_V 0.87 0.01
241_S 57_Q 0.87 0.01
295_Q 57_Q 0.87 0.01
315_D 25_L 0.87 0.01
257_L 73_N 0.87 0.01
151_V 75_A 0.87 0.01
215_F 103_L 0.87 0.01
232_I 78_I 0.87 0.01
274_D 47_H 0.87 0.01
257_L 89_V 0.86 0.01
333_H 51_I 0.86 0.01
134_S 42_G 0.86 0.01
294_S 62_A 0.86 0.01
157_Q 41_T 0.86 0.01
177_N 68_G 0.86 0.01
179_L 44_S 0.86 0.01
202_V 54_H 0.86 0.01
43_A 26_D 0.86 0.01
85_P 89_V 0.86 0.01
261_K 34_T 0.86 0.01
123_N 39_I 0.86 0.01
94_N 102_K 0.86 0.01
277_R 97_L 0.86 0.01
81_L 90_M 0.85 0.01
286_M 50_S 0.85 0.01
183_Q 34_T 0.85 0.01
42_A 6_L 0.85 0.01
147_L 52_A 0.85 0.01
273_F 45_S 0.85 0.01
228_R 18_K 0.85 0.01
78_Q 38_I 0.85 0.01
277_R 100_L 0.85 0.01
294_S 21_D 0.85 0.01
64_I 28_Q 0.84 0.01
61_W 38_I 0.84 0.01
153_A 18_K 0.84 0.01
18_R 87_V 0.84 0.01
204_Q 84_D 0.84 0.01
155_A 10_V 0.84 0.01
202_V 20_Q 0.84 0.01
163_D 55_V 0.84 0.01
314_Q 14_I 0.84 0.01
211_H 37_M 0.84 0.01
22_L 102_K 0.84 0.01
50_H 60_R 0.83 0.01
97_L 36_C 0.83 0.01
49_E 44_S 0.83 0.01
119_K 94_S 0.83 0.01
151_V 48_V 0.83 0.01
236_L 82_L 0.83 0.01
212_F 44_S 0.83 0.01
37_A 53_D 0.83 0.01
64_I 41_T 0.83 0.01
200_P 39_I 0.83 0.01
90_N 79_V 0.83 0.01
27_D 104_W 0.83 0.01
153_A 26_D 0.83 0.01
80_L 21_D 0.83 0.01
93_I 96_R 0.83 0.01
256_L 57_Q 0.83 0.01
151_V 35_D 0.83 0.01
56_D 74_S 0.82 0.01
250_L 28_Q 0.82 0.01
91_A 40_C 0.82 0.01
200_P 89_V 0.82 0.01
314_Q 70_E 0.82 0.01
285_M 52_A 0.82 0.01
153_A 53_D 0.82 0.01
253_E 47_H 0.82 0.01
264_S 38_I 0.82 0.01
209_A 75_A 0.82 0.01
167_N 73_N 0.82 0.01
114_G 45_S 0.82 0.01
155_A 82_L 0.82 0.00
294_S 29_G 0.82 0.00
90_N 70_E 0.82 0.00
332_C 25_L 0.81 0.00
176_G 44_S 0.81 0.00
112_V 84_D 0.81 0.00
224_G 66_P 0.81 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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