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OPENSEQ.org

LNT - YBEY
UniProt: P23930 - P0A898
Length: 667
Sequences: 391
Seq/Len: 0.62
I_Prob: 0.00

LNT - Apolipoprotein N-acyltransferase
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LNT
YBEY - Endoribonuclease YbeY
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBEY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_L 148_D 1.44 0.00
27_A 95_K 1.30 0.00
265_W 83_L 1.28 0.00
444_T 92_V 1.20 0.00
411_S 92_V 1.20 0.00
265_W 69_S 1.19 0.00
429_A 148_D 1.19 0.00
419_S 70_F 1.18 0.00
422_P 69_S 1.18 0.00
354_L 69_S 1.16 0.00
409_T 70_F 1.15 0.00
366_S 113_V 1.15 0.00
422_P 83_L 1.14 0.00
265_W 119_L 1.12 0.00
422_P 119_L 1.11 0.00
403_D 87_V 1.11 0.00
408_L 145_G 1.10 0.00
413_D 119_L 1.10 0.00
128_A 43_I 1.10 0.00
231_I 70_F 1.09 0.00
333_Y 54_L 1.09 0.00
361_P 89_C 1.07 0.00
140_G 54_L 1.06 0.00
372_Q 27_W 1.06 0.00
487_G 58_Y 1.05 0.00
361_P 27_W 1.05 0.00
407_L 32_I 1.04 0.00
227_V 108_W 1.04 0.00
391_I 40_E 1.03 0.00
227_V 120_L 1.03 0.00
406_Y 41_V 1.03 0.00
129_P 58_Y 1.03 0.00
149_L 44_R 1.02 0.00
413_D 69_S 1.02 0.00
422_P 71_P 1.02 0.00
274_E 113_V 1.01 0.00
364_S 63_K 1.01 0.00
226_M 101_G 1.00 0.00
76_Y 89_C 1.00 0.00
419_S 45_V 0.99 0.00
206_F 43_I 0.99 0.00
437_A 71_P 0.99 0.00
454_P 72_F 0.98 0.00
263_I 73_E 0.98 0.00
265_W 71_P 0.98 0.00
481_T 44_R 0.98 0.00
395_Q 145_G 0.98 0.00
483_Y 8_L 0.97 0.00
149_L 89_C 0.97 0.00
391_I 90_R 0.96 0.00
265_W 84_G 0.95 0.00
427_Q 93_V 0.95 0.00
457_E 135_A 0.95 0.00
31_Y 71_P 0.95 0.00
164_A 145_G 0.95 0.00
69_G 24_F 0.95 0.00
472_T 128_D 0.94 0.00
216_P 140_I 0.94 0.00
27_A 132_E 0.94 0.00
419_S 82_L 0.93 0.00
130_A 8_L 0.93 0.00
20_F 135_A 0.93 0.00
237_W 119_L 0.93 0.00
140_G 145_G 0.93 0.00
372_Q 89_C 0.93 0.00
413_D 83_L 0.92 0.00
484_A 28_L 0.92 0.00
382_L 32_I 0.92 0.00
366_S 87_V 0.92 0.00
407_L 24_F 0.92 0.00
158_G 94_E 0.91 0.00
449_T 42_T 0.91 0.00
130_A 145_G 0.91 0.00
136_E 32_I 0.90 0.00
107_L 148_D 0.90 0.00
28_F 106_A 0.89 0.00
313_Y 94_E 0.89 0.00
30_P 110_H 0.89 0.00
481_T 50_E 0.89 0.00
264_I 29_N 0.89 0.00
362_M 42_T 0.89 0.00
203_A 98_Q 0.88 0.00
96_L 103_P 0.88 0.00
315_T 23_Q 0.88 0.00
60_G 45_V 0.88 0.00
195_L 49_A 0.88 0.00
107_L 145_G 0.88 0.00
268_S 51_S 0.88 0.00
413_D 84_G 0.87 0.00
109_A 87_V 0.87 0.00
237_W 71_P 0.87 0.00
183_L 43_I 0.87 0.00
444_T 89_C 0.87 0.00
375_L 19_P 0.87 0.00
413_D 71_P 0.87 0.00
453_G 23_Q 0.86 0.00
129_P 141_M 0.86 0.00
494_L 38_E 0.86 0.00
35_P 43_I 0.86 0.00
492_W 31_V 0.86 0.00
30_P 107_H 0.86 0.00
141_W 112_V 0.86 0.00
28_F 58_Y 0.86 0.00
440_L 120_L 0.85 0.00
431_M 145_G 0.85 0.00
462_I 106_A 0.85 0.00
154_S 103_P 0.85 0.00
164_A 146_Y 0.85 0.00
40_S 41_V 0.85 0.00
22_A 113_V 0.85 0.00
332_R 58_Y 0.85 0.00
497_L 103_P 0.84 0.00
151_F 88_I 0.84 0.00
144_T 99_E 0.84 0.00
78_S 46_V 0.84 0.00
293_S 101_G 0.84 0.00
263_I 26_T 0.84 0.00
207_P 98_Q 0.84 0.00
313_Y 119_L 0.84 0.00
287_E 113_V 0.84 0.00
237_W 82_L 0.84 0.00
165_P 89_C 0.83 0.00
77_V 86_L 0.83 0.00
192_W 103_P 0.83 0.00
71_G 41_V 0.83 0.00
130_A 135_A 0.83 0.00
358_F 71_P 0.83 0.00
140_G 42_T 0.83 0.00
420_I 58_Y 0.83 0.00
413_D 63_K 0.83 0.00
140_G 144_L 0.83 0.00
476_P 113_V 0.82 0.00
334_N 86_L 0.82 0.00
81_T 103_P 0.82 0.00
361_P 109_A 0.82 0.00
443_S 16_S 0.82 0.00
125_A 148_D 0.82 0.00
249_Y 75_P 0.82 0.00
149_L 51_S 0.82 0.00
31_Y 72_F 0.82 0.00
78_S 89_C 0.81 0.00
39_I 52_H 0.81 0.00
481_T 92_V 0.81 0.00
312_T 94_E 0.81 0.00
407_L 43_I 0.81 0.00
382_L 28_L 0.81 0.00
89_V 95_K 0.81 0.00
433_A 87_V 0.81 0.00
17_A 103_P 0.81 0.00
124_V 41_V 0.81 0.00
450_A 102_K 0.81 0.00
273_L 22_S 0.81 0.00
438_R 89_C 0.80 0.00
166_I 144_L 0.80 0.00
409_T 80_M 0.80 0.00
99_A 25_Q 0.80 0.00
444_T 100_Q 0.80 0.00
422_P 7_D 0.80 0.00
251_N 128_D 0.80 0.00
263_I 14_D 0.80 0.00
465_F 89_C 0.80 0.00
62_C 41_V 0.80 0.00
106_G 94_E 0.80 0.00
113_S 140_I 0.80 0.00
189_K 41_V 0.80 0.00
65_F 64_P 0.80 0.00
266_P 67_V 0.80 0.00
439_P 140_I 0.80 0.00
351_L 87_V 0.80 0.00
97_L 77_G 0.80 0.00
421_G 71_P 0.80 0.00
249_Y 70_F 0.79 0.00
483_Y 54_L 0.79 0.00
329_S 144_L 0.79 0.00
372_Q 50_E 0.79 0.00
171_A 128_D 0.79 0.00
395_Q 52_H 0.79 0.00
208_L 147_E 0.79 0.00
109_A 101_G 0.79 0.00
31_Y 142_L 0.79 0.00
353_P 69_S 0.79 0.00
56_S 64_P 0.79 0.00
25_T 93_V 0.79 0.00
444_T 27_W 0.79 0.00
95_V 143_A 0.79 0.00
199_V 95_K 0.79 0.00
385_A 111_M 0.78 0.00
446_N 39_S 0.78 0.00
166_I 45_V 0.78 0.00
209_R 146_Y 0.78 0.00
153_Y 93_V 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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