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OPENSEQ.org

RATA - SSRP
UniProt: P0AGL5 - P0A832
Length: 318
Sequences: 216
Seq/Len: 0.73
I_Prob: 0.00

RATA - Ribosome association toxin RatA
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RATA
SSRP - SsrA-binding protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SSRP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_R 145_R 1.47 0.00
115_I 23_E 1.31 0.00
98_K 34_L 1.28 0.00
121_F 117_Y 1.24 0.00
140_A 87_T 1.20 0.00
116_E 64_F 1.19 0.00
141_A 146_E 1.18 0.00
54_E 127_I 1.17 0.00
43_F 134_K 1.16 0.00
147_F 80_V 1.16 0.00
133_G 47_G 1.15 0.00
37_V 100_L 1.12 0.00
32_Q 146_E 1.12 0.00
60_M 100_L 1.12 0.00
138_E 64_F 1.10 0.00
142_N 114_L 1.10 0.00
89_M 37_Q 1.07 0.00
19_R 81_V 1.07 0.00
68_K 118_W 1.06 0.00
63_A 93_N 1.06 0.00
84_N 94_Q 1.06 0.00
84_N 97_L 1.06 0.00
69_A 118_W 1.05 0.00
93_D 116_L 1.05 0.00
142_N 146_E 1.04 0.00
73_K 156_K 1.04 0.00
25_Y 30_F 1.04 0.00
121_F 118_W 1.03 0.00
111_E 150_D 1.03 0.00
86_S 123_C 1.02 0.00
99_L 76_A 1.02 0.00
14_M 64_F 1.02 0.00
146_A 83_D 1.02 0.00
125_N 83_D 1.02 0.00
134_R 50_N 1.01 0.00
144_V 145_R 1.01 0.00
68_K 63_A 1.00 0.00
25_Y 98_D 0.99 0.00
156_S 129_V 0.99 0.00
141_A 154_I 0.98 0.00
111_E 92_L 0.98 0.00
119_L 128_G 0.98 0.00
81_L 145_R 0.97 0.00
54_E 18_K 0.97 0.00
67_S 127_I 0.97 0.00
101_G 77_S 0.97 0.00
46_G 81_V 0.96 0.00
132_F 63_A 0.96 0.00
107_P 35_A 0.96 0.00
31_Y 145_R 0.96 0.00
147_F 102_G 0.95 0.00
51_R 44_L 0.95 0.00
29_Q 152_A 0.95 0.00
132_F 121_A 0.95 0.00
116_E 127_I 0.95 0.00
87_I 49_A 0.95 0.00
119_L 55_Y 0.95 0.00
72_S 29_E 0.94 0.00
154_V 156_K 0.94 0.00
137_K 146_E 0.94 0.00
104_K 104_V 0.94 0.00
89_M 43_S 0.93 0.00
35_N 54_S 0.92 0.00
144_V 67_G 0.92 0.00
142_N 35_A 0.92 0.00
110_Q 72_P 0.91 0.00
145_Q 150_D 0.91 0.00
78_R 92_L 0.91 0.00
113_C 123_C 0.91 0.00
98_K 75_V 0.90 0.00
68_K 84_P 0.90 0.00
115_I 143_K 0.90 0.00
142_N 59_R 0.90 0.00
51_R 110_T 0.90 0.00
133_G 156_K 0.90 0.00
31_Y 15_A 0.89 0.00
90_N 18_K 0.89 0.00
87_I 34_L 0.89 0.00
128_I 97_L 0.88 0.00
130_L 112_V 0.88 0.00
131_A 63_A 0.88 0.00
115_I 93_N 0.88 0.00
48_T 82_C 0.87 0.00
52_I 112_V 0.87 0.00
50_S 66_F 0.87 0.00
101_G 39_W 0.87 0.00
144_V 84_P 0.87 0.00
149_V 116_L 0.86 0.00
73_K 106_R 0.86 0.00
132_F 82_C 0.86 0.00
55_S 43_S 0.86 0.00
64_V 114_L 0.85 0.00
21_A 13_T 0.85 0.00
21_A 118_W 0.85 0.00
156_S 148_Q 0.85 0.00
139_L 37_Q 0.85 0.00
91_L 39_W 0.85 0.00
143_M 102_G 0.85 0.00
58_G 16_L 0.85 0.00
88_L 92_L 0.85 0.00
135_V 101_Y 0.84 0.00
57_P 120_N 0.84 0.00
24_P 22_H 0.84 0.00
99_L 47_G 0.84 0.00
134_R 69_N 0.84 0.00
108_L 134_K 0.84 0.00
50_S 142_I 0.83 0.00
125_N 85_T 0.83 0.00
82_T 16_L 0.83 0.00
52_I 130_A 0.83 0.00
117_F 118_W 0.83 0.00
19_R 52_S 0.83 0.00
115_I 111_V 0.83 0.00
30_M 151_K 0.82 0.00
45_P 114_L 0.82 0.00
115_I 83_D 0.82 0.00
79_N 14_I 0.82 0.00
79_N 39_W 0.82 0.00
107_P 28_E 0.81 0.00
41_P 114_L 0.81 0.00
117_F 70_I 0.81 0.00
137_K 22_H 0.81 0.00
24_P 54_S 0.81 0.00
81_L 84_P 0.81 0.00
68_K 48_K 0.81 0.00
146_A 19_R 0.81 0.00
143_M 23_E 0.81 0.00
149_V 140_S 0.81 0.00
130_L 30_F 0.81 0.00
127_L 46_A 0.80 0.00
35_N 48_K 0.80 0.00
43_F 114_L 0.80 0.00
76_T 43_S 0.80 0.00
45_P 134_K 0.80 0.00
125_N 111_V 0.80 0.00
46_G 63_A 0.80 0.00
39_S 30_F 0.80 0.00
25_Y 68_A 0.80 0.00
48_T 149_V 0.80 0.00
113_C 140_S 0.80 0.00
133_G 134_K 0.79 0.00
87_I 52_S 0.79 0.00
143_M 117_Y 0.79 0.00
101_G 73_M 0.79 0.00
90_N 116_L 0.79 0.00
124_T 19_R 0.79 0.00
81_L 13_T 0.79 0.00
21_A 21_R 0.79 0.00
66_V 97_L 0.79 0.00
38_Q 106_R 0.79 0.00
131_A 81_V 0.78 0.00
42_Q 59_R 0.78 0.00
15_P 34_L 0.78 0.00
72_S 95_R 0.78 0.00
25_Y 59_R 0.78 0.00
15_P 99_S 0.78 0.00
119_L 56_V 0.78 0.00
54_E 154_I 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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