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OPENSEQ.org

NUSA - RBFA
UniProt: P0AFF6 - P0A7G2
Length: 628
Sequences: 370
Seq/Len: 0.60
I_Prob: 0.00

NUSA - Transcription elongation protein NusA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NUSA
RBFA - Ribosome-binding factor A
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RBFA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_E 28_K 1.44 0.00
120_E 54_V 1.33 0.00
364_D 26_E 1.28 0.00
133_H 53_Y 1.27 0.00
396_E 32_L 1.25 0.00
453_V 38_V 1.23 0.00
421_Q 52_V 1.22 0.00
483_M 37_T 1.21 0.00
220_V 73_Q 1.16 0.00
203_E 52_V 1.15 0.00
97_I 13_Q 1.14 0.00
57_D 38_V 1.13 0.00
2_N 102_S 1.12 0.00
452_G 14_E 1.11 0.00
162_I 88_R 1.11 0.00
18_L 113_V 1.09 0.00
85_E 76_S 1.08 0.00
271_I 2_A 1.07 0.00
354_A 52_V 1.07 0.00
93_V 20_A 1.05 0.00
186_V 94_E 1.05 0.00
103_D 79_I 1.04 0.00
159_E 57_L 1.03 0.00
53_S 78_F 1.03 0.00
182_V 14_E 1.02 0.00
66_D 69_I 1.02 0.00
284_V 54_V 1.01 0.00
15_E 112_L 1.00 0.00
240_T 53_Y 1.00 0.00
46_R 14_E 0.99 0.00
146_N 13_Q 0.99 0.00
165_E 32_L 0.98 0.00
479_G 3_K 0.98 0.00
462_Q 16_Q 0.98 0.00
117_K 28_K 0.97 0.00
91_D 84_G 0.97 0.00
348_H 13_Q 0.97 0.00
197_V 23_L 0.96 0.00
179_V 36_T 0.96 0.00
403_V 109_M 0.96 0.00
99_S 37_T 0.95 0.00
365_I 22_I 0.95 0.00
211_I 71_A 0.95 0.00
107_T 79_I 0.95 0.00
216_I 75_A 0.95 0.00
91_D 40_G 0.95 0.00
332_S 96_T 0.94 0.00
488_I 79_I 0.94 0.00
293_V 16_Q 0.93 0.00
267_G 32_L 0.93 0.00
264_T 82_L 0.93 0.00
274_V 42_E 0.92 0.00
284_V 11_V 0.91 0.00
176_G 23_L 0.91 0.00
466_D 18_E 0.91 0.00
248_V 47_L 0.91 0.00
274_V 74_E 0.91 0.00
23_I 47_L 0.91 0.00
125_M 3_K 0.91 0.00
469_D 52_V 0.90 0.00
413_A 71_A 0.90 0.00
209_F 11_V 0.90 0.00
451_R 89_L 0.90 0.00
179_V 95_L 0.90 0.00
40_E 42_E 0.90 0.00
137_I 85_K 0.90 0.00
18_L 91_I 0.89 0.00
474_T 60_K 0.89 0.00
312_G 76_S 0.88 0.00
263_S 45_R 0.88 0.00
107_T 113_V 0.88 0.00
462_Q 39_S 0.88 0.00
358_T 15_M 0.88 0.00
443_D 102_S 0.88 0.00
250_A 47_L 0.88 0.00
160_A 69_I 0.88 0.00
103_D 13_Q 0.88 0.00
321_N 105_E 0.88 0.00
493_D 35_M 0.87 0.00
137_I 115_S 0.87 0.00
137_I 62_E 0.87 0.00
401_P 76_S 0.87 0.00
389_M 15_M 0.87 0.00
339_M 104_V 0.86 0.00
89_L 5_F 0.86 0.00
330_Q 12_A 0.85 0.00
130_F 58_N 0.85 0.00
181_G 84_G 0.85 0.00
271_I 102_S 0.85 0.00
181_G 39_S 0.85 0.00
74_E 106_G 0.85 0.00
392_L 108_R 0.85 0.00
336_L 5_F 0.85 0.00
316_Q 90_R 0.84 0.00
472_G 96_T 0.84 0.00
241_N 78_F 0.84 0.00
201_K 41_V 0.84 0.00
71_P 37_T 0.83 0.00
179_V 9_Q 0.83 0.00
273_I 38_V 0.83 0.00
101_T 52_V 0.83 0.00
262_V 32_L 0.83 0.00
176_G 44_S 0.83 0.00
180_R 37_T 0.83 0.00
195_L 18_E 0.83 0.00
101_T 101_N 0.83 0.00
222_E 38_V 0.83 0.00
135_G 47_L 0.83 0.00
66_D 66_K 0.82 0.00
220_V 14_E 0.82 0.00
51_R 77_G 0.82 0.00
340_T 110_S 0.82 0.00
466_D 114_T 0.82 0.00
137_I 108_R 0.82 0.00
341_V 12_A 0.82 0.00
176_G 110_S 0.82 0.00
240_T 124_R 0.81 0.00
445_A 84_G 0.81 0.00
245_I 109_M 0.81 0.00
255_R 80_R 0.81 0.00
286_N 89_L 0.80 0.00
101_T 38_V 0.80 0.00
162_I 83_L 0.80 0.00
374_V 92_V 0.80 0.00
181_G 88_R 0.80 0.00
271_I 52_V 0.80 0.00
52_K 111_N 0.80 0.00
191_R 104_V 0.80 0.00
350_A 17_K 0.79 0.00
160_A 94_E 0.79 0.00
364_D 9_Q 0.79 0.00
415_A 113_V 0.79 0.00
50_D 119_H 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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