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OPENSEQ.org
MIAB - PHOL
UniProt: P0AEI1 - P0A9K3
Length: 820
Sequences: 464
Seq/Len: 0.61
I_Prob: 0.01
MIAB - (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
Paralog alert: 0.79 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: MIAB RIMO 		PHOL - PhoH-like protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PHOL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
262_L 223_V 1.65 0.01
182_L 267_I 1.63 0.01
330_F 237_A 1.60 0.01
39_E 237_A 1.48 0.01
357_E 131_N 1.35 0.00
163_Y 303_H 1.28 0.00
370_N 274_I 1.23 0.00
162_T 305_E 1.22 0.00
186_A 190_Q 1.21 0.00
190_A 28_N 1.15 0.00
314_T 192_V 1.14 0.00
248_I 44_D 1.14 0.00
433_N 111_I 1.14 0.00
220_D 120_P 1.13 0.00
382_G 278_R 1.13 0.00
151_V 189_S 1.13 0.00
426_E 114_K 1.12 0.00
218_F 220_V 1.12 0.00
223_R 237_A 1.11 0.00
357_E 239_I 1.10 0.00
396_S 192_V 1.09 0.00
322_M 62_I 1.09 0.00
163_Y 247_T 1.08 0.00
257_E 28_N 1.08 0.00
36_D 293_D 1.08 0.00
234_I 280_T 1.07 0.00
96_A 196_L 1.06 0.00
151_V 208_G 1.06 0.00
371_Q 244_S 1.06 0.00
186_A 267_I 1.06 0.00
196_V 317_V 1.03 0.00
140_P 290_V 1.03 0.00
334_Y 26_D 1.02 0.00
36_D 297_I 1.02 0.00
286_Y 223_V 1.02 0.00
162_T 38_I 1.01 0.00
257_E 210_E 1.01 0.00
190_A 40_I 1.00 0.00
418_M 262_N 1.00 0.00
363_Y 48_K 1.00 0.00
398_M 236_D 1.00 0.00
418_M 223_V 1.00 0.00
296_A 80_I 0.99 0.00
35_T 274_I 0.99 0.00
261_F 314_A 0.99 0.00
128_I 29_I 0.99 0.00
154_M 190_Q 0.98 0.00
102_I 267_I 0.98 0.00
101_I 303_H 0.97 0.00
244_F 314_A 0.97 0.00
383_T 118_I 0.97 0.00
104_G 174_A 0.97 0.00
136_F 153_V 0.97 0.00
10_W 206_M 0.97 0.00
104_G 196_L 0.97 0.00
56_Q 190_Q 0.97 0.00
425_V 237_A 0.97 0.00
158_N 228_Y 0.96 0.00
273_I 322_A 0.96 0.00
29_T 210_E 0.95 0.00
355_E 279_N 0.95 0.00
162_T 294_V 0.95 0.00
196_V 218_R 0.95 0.00
158_N 171_T 0.94 0.00
433_N 206_M 0.94 0.00
32_Y 8_I 0.94 0.00
20_S 237_A 0.94 0.00
27_D 168_I 0.94 0.00
424_D 290_V 0.94 0.00
236_F 167_R 0.94 0.00
280_T 315_R 0.94 0.00
275_N 89_I 0.94 0.00
196_V 326_A 0.93 0.00
181_I 318_N 0.93 0.00
179_D 53_P 0.93 0.00
181_I 299_F 0.93 0.00
390_E 122_T 0.93 0.00
358_K 156_A 0.93 0.00
86_S 171_T 0.92 0.00
115_I 126_A 0.92 0.00
126_V 56_V 0.91 0.00
421_K 192_V 0.91 0.00
246_D 206_M 0.91 0.00
334_Y 264_K 0.91 0.00
148_T 48_K 0.91 0.00
322_M 296_E 0.90 0.00
234_I 40_I 0.90 0.00
281_H 228_Y 0.90 0.00
405_E 305_E 0.90 0.00
222_L 192_V 0.90 0.00
149_A 153_V 0.90 0.00
163_Y 213_E 0.90 0.00
196_V 200_Y 0.89 0.00
340_A 52_R 0.89 0.00
150_F 274_I 0.89 0.00
290_I 219_N 0.89 0.00
289_I 213_E 0.89 0.00
384_T 132_I 0.89 0.00
180_D 40_I 0.89 0.00
90_E 318_N 0.89 0.00
365_L 290_V 0.89 0.00
223_R 120_P 0.89 0.00
421_K 244_S 0.89 0.00
67_K 63_L 0.89 0.00
275_N 116_G 0.89 0.00
387_I 168_I 0.89 0.00
187_Q 247_T 0.88 0.00
431_Y 30_K 0.88 0.00
45_L 22_C 0.88 0.00
162_T 7_E 0.88 0.00
346_A 266_V 0.88 0.00
78_I 295_E 0.87 0.00
257_E 126_A 0.87 0.00
105_P 121_R 0.87 0.00
378_R 244_S 0.87 0.00
403_R 240_I 0.87 0.00
196_V 162_R 0.87 0.00
293_L 314_A 0.87 0.00
293_L 303_H 0.87 0.00
289_I 114_K 0.87 0.00
338_F 290_V 0.87 0.00
153_I 115_R 0.87 0.00
96_A 247_T 0.87 0.00
261_F 38_I 0.87 0.00
381_L 259_I 0.87 0.00
443_E 244_S 0.87 0.00
379_R 15_N 0.86 0.00
153_I 292_A 0.86 0.00
27_D 115_R 0.86 0.00
242_I 131_N 0.86 0.00
296_A 287_A 0.86 0.00
4_K 14_D 0.86 0.00
228_I 62_I 0.86 0.00
133_I 259_I 0.85 0.00
300_I 192_V 0.85 0.00
78_I 167_R 0.85 0.00
182_L 214_K 0.85 0.00
86_S 235_N 0.85 0.00
129_S 120_P 0.85 0.00
85_A 44_D 0.85 0.00
294_R 80_I 0.84 0.00
212_D 80_I 0.84 0.00
384_T 271_V 0.84 0.00
45_L 155_A 0.84 0.00
162_T 92_A 0.84 0.00
331_D 138_T 0.84 0.00
331_D 190_Q 0.84 0.00
322_M 311_P 0.84 0.00
245_T 171_T 0.84 0.00
150_F 153_V 0.84 0.00
273_I 204_F 0.84 0.00
10_W 116_G 0.84 0.00
162_T 126_A 0.84 0.00
75_D 294_V 0.84 0.00
351_D 132_I 0.84 0.00
346_A 157_V 0.84 0.00
366_Q 113_T 0.84 0.00
190_A 169_L 0.84 0.00
362_L 265_A 0.83 0.00
114_M 168_I 0.83 0.00
213_G 36_L 0.83 0.00
367_E 244_S 0.83 0.00
91_H 228_Y 0.83 0.00
234_I 211_K 0.83 0.00
380_M 267_I 0.83 0.00
184_E 223_V 0.83 0.00
367_E 168_I 0.83 0.00
373_A 287_A 0.83 0.00
234_I 307_V 0.82 0.00
236_F 315_R 0.82 0.00
222_L 286_H 0.82 0.00
120_G 122_T 0.82 0.00
80_V 302_F 0.82 0.00
84_V 235_N 0.82 0.00
81_G 265_A 0.82 0.00
357_E 163_Q 0.82 0.00
229_D 321_E 0.82 0.00
251_V 137_I 0.82 0.00
77_I 240_I 0.82 0.00
373_A 228_Y 0.81 0.00
97_H 21_L 0.81 0.00
284_L 169_L 0.81 0.00
160_Y 265_A 0.81 0.00
293_L 236_D 0.81 0.00
169_T 153_V 0.81 0.00
323_K 192_V 0.81 0.00
354_P 290_V 0.81 0.00
155_E 153_V 0.81 0.00
199_L 18_L 0.81 0.00
393_S 265_A 0.81 0.00
398_M 15_N 0.81 0.00
404_T 29_I 0.81 0.00
57_E 180_K 0.81 0.00
330_F 66_L 0.81 0.00
153_I 26_D 0.81 0.00
174_V 67_Y 0.80 0.00
270_S 63_L 0.80 0.00
334_Y 38_I 0.80 0.00
231_I 166_R 0.80 0.00
346_A 238_F 0.80 0.00
206_W 223_V 0.80 0.00
246_D 220_V 0.80 0.00
380_M 214_K 0.80 0.00
244_F 205_E 0.80 0.00
379_R 169_L 0.80 0.00
10_W 122_T 0.80 0.00
276_L 239_I 0.80 0.00
78_I 38_I 0.80 0.00
381_L 40_I 0.80 0.00
222_L 317_V 0.80 0.00
101_I 11_E 0.79 0.00
163_Y 133_L 0.79 0.00
245_T 192_V 0.79 0.00
196_V 325_E 0.79 0.00
257_E 206_M 0.79 0.00
292_K 303_H 0.79 0.00
86_S 87_L 0.79 0.00
228_I 154_A 0.79 0.00
228_I 119_K 0.79 0.00
123_S 315_R 0.78 0.00
199_L 208_G 0.78 0.00
334_Y 8_I 0.78 0.00
182_L 120_P 0.78 0.00
61_H 244_S 0.78 0.00
224_L 266_V 0.78 0.00
45_L 129_I 0.78 0.00
179_D 321_E 0.78 0.00
343_G 140_G 0.78 0.00
353_V 80_I 0.78 0.00
293_L 169_L 0.78 0.00
154_M 70_T 0.78 0.00
418_M 28_N 0.78 0.00
66_W 205_E 0.78 0.00
50_S 171_T 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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