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OPENSEQ.org

FTSW - RSMH
UniProt: P0ABG4 - P60390
Length: 727
Sequences: 1015
Seq/Len: 1.53
I_Prob: 0.01

FTSW - Lipid II flippase FtsW
Paralog alert: 0.88 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FTSW RODA
RSMH - Ribosomal RNA small subunit methyltransferase H
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
370_K 202_T 1.21 0.01
293_E 241_F 1.10 0.00
227_G 178_T 1.02 0.00
296_T 118_F 1.00 0.00
220_W 28_I 0.99 0.00
251_W 289_P 0.98 0.00
320_F 300_A 0.97 0.00
199_G 201_A 0.97 0.00
199_G 107_P 0.96 0.00
48_L 247_R 0.96 0.00
226_I 307_I 0.95 0.00
289_E 289_P 0.94 0.00
370_K 118_F 0.91 0.00
149_A 303_S 0.90 0.00
141_L 177_M 0.89 0.00
299_I 155_Y 0.89 0.00
150_E 200_P 0.88 0.00
369_T 202_T 0.88 0.00
68_M 265_G 0.87 0.00
372_L 118_F 0.86 0.00
63_V 308_A 0.84 0.00
312_V 11_L 0.84 0.00
329_I 111_D 0.84 0.00
95_L 248_I 0.82 0.00
388_S 79_F 0.82 0.00
383_S 199_H 0.82 0.00
124_I 48_E 0.80 0.00
222_F 79_F 0.80 0.00
193_L 292_E 0.80 0.00
61_I 137_A 0.79 0.00
91_L 159_R 0.79 0.00
322_V 284_L 0.78 0.00
373_T 241_F 0.78 0.00
111_S 267_P 0.78 0.00
222_F 160_F 0.78 0.00
226_I 151_V 0.78 0.00
79_F 152_L 0.77 0.00
309_Y 190_A 0.77 0.00
67_S 121_D 0.76 0.00
210_A 17_N 0.76 0.00
284_S 284_L 0.76 0.00
98_I 62_A 0.76 0.00
98_I 309_E 0.75 0.00
357_L 265_G 0.75 0.00
377_I 168_I 0.74 0.00
391_I 154_T 0.74 0.00
198_L 266_L 0.74 0.00
323_A 56_R 0.74 0.00
370_K 304_V 0.74 0.00
198_L 222_A 0.74 0.00
109_R 53_A 0.74 0.00
360_V 30_G 0.74 0.00
183_G 50_R 0.73 0.00
329_I 248_I 0.73 0.00
59_G 267_P 0.73 0.00
197_D 201_A 0.72 0.00
317_L 112_A 0.72 0.00
376_L 140_L 0.72 0.00
85_D 240_S 0.72 0.00
164_L 300_A 0.72 0.00
370_K 34_R 0.72 0.00
99_T 16_V 0.72 0.00
383_S 89_R 0.72 0.00
288_L 118_F 0.71 0.00
251_W 88_E 0.71 0.00
190_V 232_P 0.71 0.00
253_P 241_F 0.71 0.00
186_L 170_E 0.71 0.00
295_H 157_E 0.71 0.00
353_S 100_L 0.71 0.00
325_R 157_E 0.70 0.00
393_M 82_L 0.70 0.00
283_N 204_T 0.70 0.00
64_T 34_R 0.70 0.00
192_L 219_I 0.70 0.00
243_R 53_A 0.70 0.00
211_M 268_M 0.70 0.00
54_G 142_T 0.70 0.00
137_R 242_H 0.70 0.00
137_R 118_F 0.70 0.00
244_I 144_E 0.70 0.00
310_V 224_K 0.70 0.00
154_L 252_F 0.70 0.00
158_C 182_E 0.69 0.00
198_L 303_S 0.69 0.00
66_A 174_E 0.69 0.00
216_G 158_E 0.69 0.00
301_A 26_I 0.69 0.00
321_F 286_K 0.68 0.00
243_R 129_D 0.68 0.00
250_F 74_I 0.68 0.00
117_G 295_A 0.68 0.00
196_P 301_R 0.68 0.00
335_E 9_T 0.68 0.00
363_A 193_V 0.68 0.00
150_E 201_A 0.68 0.00
357_L 95_I 0.67 0.00
85_D 172_N 0.67 0.00
348_I 97_G 0.67 0.00
373_T 32_F 0.67 0.00
125_V 28_I 0.67 0.00
137_R 301_R 0.67 0.00
116_L 147_D 0.67 0.00
135_A 79_F 0.67 0.00
96_A 140_L 0.66 0.00
329_I 51_L 0.66 0.00
137_R 202_T 0.66 0.00
363_A 34_R 0.66 0.00
125_V 109_L 0.66 0.00
254_W 79_F 0.66 0.00
150_E 118_F 0.66 0.00
327_M 112_A 0.66 0.00
309_Y 254_R 0.66 0.00
224_A 300_A 0.66 0.00
90_I 147_D 0.65 0.00
369_T 118_F 0.65 0.00
370_K 218_E 0.65 0.00
230_I 26_I 0.65 0.00
133_K 226_S 0.65 0.00
271_F 161_A 0.65 0.00
395_L 231_A 0.65 0.00
183_G 294_V 0.65 0.00
137_R 249_V 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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