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OPENSEQ.org

CDSA - RRF
UniProt: P0ABG1 - P0A805
Length: 470
Sequences: 1024
Seq/Len: 2.24
I_Prob: 0.17

CDSA - Phosphatidate cytidylyltransferase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CDSA YNBB
RRF - Ribosome-recycling factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RRF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
184_V 112_D 1.34 0.17
264_I 29_T 1.33 0.17
251_G 15_K 1.30 0.16
31_V 105_L 1.12 0.09
127_T 60_E 1.11 0.09
189_T 141_A 1.09 0.08
270_A 12_R 1.08 0.08
189_T 69_V 1.03 0.07
187_G 12_R 1.01 0.07
193_F 172_E 1.01 0.06
233_L 159_D 0.99 0.06
261_L 18_E 0.99 0.06
6_L 135_A 0.98 0.06
116_S 128_V 0.98 0.06
189_T 71_D 0.97 0.06
179_K 78_V 0.97 0.06
264_I 89_L 0.97 0.06
71_F 125_R 0.96 0.05
168_A 125_R 0.94 0.05
189_T 117_V 0.94 0.05
189_T 154_R 0.93 0.05
5_R 165_D 0.92 0.04
272_P 68_N 0.91 0.04
68_L 111_K 0.90 0.04
193_F 152_D 0.89 0.04
63_G 78_V 0.89 0.04
64_L 145_D 0.89 0.04
254_I 56_S 0.88 0.04
126_L 128_V 0.88 0.04
161_V 144_K 0.88 0.04
177_K 176_A 0.88 0.04
266_S 182_L 0.87 0.04
159_I 177_D 0.87 0.04
189_T 68_N 0.87 0.04
167_G 8_D 0.87 0.04
254_I 67_I 0.86 0.04
128_I 137_D 0.86 0.04
272_P 27_I 0.86 0.04
215_V 171_I 0.86 0.04
170_M 65_L 0.85 0.04
229_L 125_R 0.85 0.04
55_R 12_R 0.85 0.04
204_S 27_I 0.85 0.04
11_V 126_V 0.84 0.04
227_A 111_K 0.84 0.04
202_V 158_D 0.84 0.03
135_M 118_R 0.84 0.03
92_S 149_S 0.83 0.03
263_R 172_E 0.83 0.03
198_A 96_S 0.83 0.03
250_S 134_D 0.82 0.03
24_P 16_C 0.82 0.03
220_L 152_D 0.82 0.03
5_R 161_Q 0.82 0.03
29_A 139_V 0.82 0.03
257_H 88_G 0.82 0.03
9_A 39_G 0.82 0.03
14_P 125_R 0.81 0.03
27_G 121_A 0.81 0.03
130_P 182_L 0.81 0.03
64_L 128_V 0.81 0.03
32_T 127_A 0.81 0.03
33_L 57_V 0.81 0.03
166_S 27_I 0.81 0.03
189_T 116_I 0.81 0.03
16_V 128_V 0.81 0.03
180_L 38_D 0.80 0.03
211_A 36_L 0.80 0.03
260_I 23_Q 0.80 0.03
127_T 27_I 0.80 0.03
177_K 101_P 0.80 0.03
40_A 43_E 0.80 0.03
141_W 158_D 0.79 0.03
228_A 134_D 0.79 0.03
127_T 93_S 0.79 0.03
241_F 40_I 0.79 0.03
139_R 113_L 0.79 0.03
175_F 147_E 0.78 0.03
24_P 182_L 0.78 0.03
10_F 119_G 0.78 0.03
193_F 100_V 0.78 0.03
98_V 156_S 0.78 0.03
38_L 173_A 0.78 0.03
270_A 8_D 0.78 0.03
222_I 119_G 0.78 0.03
274_F 3_S 0.78 0.03
33_L 112_D 0.78 0.03
237_T 67_I 0.78 0.03
210_W 127_A 0.77 0.03
132_F 159_D 0.76 0.03
168_A 89_L 0.76 0.03
237_T 77_A 0.76 0.03
131_F 118_R 0.76 0.03
96_W 26_K 0.76 0.03
250_S 161_Q 0.76 0.03
139_R 109_R 0.76 0.02
7_I 158_D 0.76 0.02
29_A 142_L 0.76 0.02
167_G 9_A 0.76 0.02
240_M 146_K 0.76 0.02
17_I 181_E 0.75 0.02
226_V 59_V 0.75 0.02
30_I 55_A 0.75 0.02
150_G 172_E 0.75 0.02
95_W 126_V 0.75 0.02
254_I 33_S 0.75 0.02
210_W 24_I 0.75 0.02
228_A 182_L 0.75 0.02
225_I 167_A 0.74 0.02
30_I 41_V 0.74 0.02
199_T 124_A 0.74 0.02
181_A 120_E 0.73 0.02
240_M 182_L 0.73 0.02
229_L 143_L 0.73 0.02
5_R 134_D 0.73 0.02
240_M 109_R 0.73 0.02
178_H 90_N 0.72 0.02
251_G 97_D 0.72 0.02
253_L 29_T 0.72 0.02
194_I 171_I 0.72 0.02
61_L 145_D 0.72 0.02
228_A 100_V 0.72 0.02
37_M 168_I 0.72 0.02
163_G 131_V 0.72 0.02
257_H 172_E 0.72 0.02
15_V 155_R 0.71 0.02
22_L 36_L 0.71 0.02
126_L 40_I 0.71 0.02
142_H 40_I 0.71 0.02
275_A 16_C 0.71 0.02
17_I 169_K 0.71 0.02
263_R 88_G 0.71 0.02
21_F 70_F 0.71 0.02
191_Q 27_I 0.70 0.02
200_A 64_T 0.70 0.02
95_W 66_K 0.70 0.02
266_S 93_S 0.70 0.02
11_V 25_S 0.70 0.02
8_S 184_Q 0.70 0.02
251_G 41_V 0.70 0.02
36_C 24_I 0.70 0.02
253_L 142_L 0.70 0.02
158_M 24_I 0.70 0.02
43_W 40_I 0.70 0.02
168_A 134_D 0.70 0.02
175_F 40_I 0.69 0.02
103_V 58_T 0.69 0.02
155_L 35_S 0.69 0.02
179_K 107_E 0.69 0.02
232_V 62_S 0.69 0.02
189_T 65_L 0.69 0.02
253_L 67_I 0.69 0.02
11_V 24_I 0.69 0.02
64_L 74_M 0.69 0.02
93_L 62_S 0.68 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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