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OPENSEQ.org

IOJAP - OBG
UniProt: P0AAT6 - P42641
Length: 495
Sequences: 369
Seq/Len: 0.84
I_Prob: 0.05

IOJAP - Ribosomal silencing factor RsfS
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IOJAP
OBG - GTPase ObgE/CgtA
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: OBG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_G 315_A 1.65 0.05
82_L 230_R 1.55 0.04
22_I 302_E 1.34 0.02
76_D 241_L 1.25 0.02
44_S 180_S 1.16 0.01
51_I 181_A 1.08 0.01
8_D 45_V 1.08 0.01
94_S 273_L 1.08 0.01
54_H 152_L 1.06 0.01
76_D 38_D 1.04 0.01
41_T 108_M 1.01 0.01
42_G 152_L 1.01 0.01
83_G 24_R 0.99 0.01
42_G 313_I 0.98 0.01
100_L 46_W 0.97 0.01
30_K 238_C 0.97 0.01
86_I 170_A 0.96 0.01
33_I 32_G 0.95 0.01
105_S 177_R 0.95 0.01
16_D 315_A 0.95 0.01
90_M 236_E 0.94 0.01
12_D 119_K 0.94 0.01
93_E 187_A 0.94 0.01
51_I 45_V 0.93 0.01
19_G 259_A 0.93 0.01
51_I 285_I 0.93 0.01
87_V 8_S 0.93 0.01
13_K 276_K 0.92 0.01
22_I 105_M 0.92 0.01
68_G 305_G 0.92 0.01
22_I 262_I 0.91 0.01
40_C 197_S 0.91 0.01
82_L 315_A 0.91 0.01
83_G 275_T 0.90 0.01
31_S 60_R 0.90 0.01
60_R 46_W 0.90 0.01
22_I 165_L 0.89 0.01
25_L 217_L 0.89 0.01
15_D 41_D 0.89 0.01
41_T 146_P 0.88 0.01
16_D 187_A 0.88 0.01
36_C 290_K 0.88 0.01
38_I 273_L 0.88 0.01
73_N 152_L 0.88 0.01
90_M 278_R 0.88 0.01
47_H 170_A 0.88 0.01
19_G 289_D 0.88 0.01
70_E 236_E 0.88 0.01
31_S 170_A 0.87 0.01
41_T 110_K 0.87 0.01
15_D 24_R 0.87 0.01
70_E 157_M 0.87 0.00
56_V 96_V 0.87 0.00
49_M 183_K 0.86 0.00
82_L 89_K 0.86 0.00
35_D 223_E 0.85 0.00
94_S 143_N 0.85 0.00
44_S 258_N 0.85 0.00
16_D 48_E 0.84 0.00
19_G 68_E 0.84 0.00
45_S 269_Y 0.84 0.00
11_I 105_M 0.84 0.00
21_D 313_I 0.84 0.00
73_N 21_V 0.84 0.00
101_E 11_V 0.83 0.00
84_D 122_W 0.83 0.00
22_I 9_I 0.83 0.00
44_S 165_L 0.83 0.00
19_G 256_V 0.83 0.00
80_V 141_K 0.83 0.00
33_I 167_M 0.82 0.00
62_A 281_V 0.82 0.00
42_G 225_A 0.82 0.00
104_W 187_A 0.82 0.00
17_L 101_T 0.82 0.00
49_M 108_M 0.82 0.00
28_Q 320_G 0.82 0.00
86_I 152_L 0.82 0.00
33_I 130_F 0.81 0.00
58_E 128_T 0.81 0.00
53_D 132_S 0.81 0.00
87_V 260_R 0.81 0.00
8_D 274_A 0.81 0.00
28_Q 116_L 0.81 0.00
92_E 280_L 0.81 0.00
17_L 155_E 0.80 0.00
84_D 235_L 0.80 0.00
58_E 45_V 0.80 0.00
89_V 301_A 0.80 0.00
10_V 211_V 0.80 0.00
25_L 323_D 0.79 0.00
62_A 114_R 0.79 0.00
100_L 47_M 0.79 0.00
63_G 245_I 0.79 0.00
14_I 54_N 0.79 0.00
90_M 157_M 0.79 0.00
33_I 71_Q 0.79 0.00
76_D 13_A 0.79 0.00
24_A 2_K 0.79 0.00
74_S 267_E 0.78 0.00
104_W 72_N 0.78 0.00
50_S 136_R 0.78 0.00
56_V 258_N 0.78 0.00
21_D 301_A 0.78 0.00
42_G 154_L 0.78 0.00
25_L 316_A 0.78 0.00
84_D 55_T 0.78 0.00
59_S 28_Y 0.77 0.00
53_D 328_V 0.77 0.00
79_V 184_P 0.77 0.00
91_Q 44_D 0.77 0.00
63_G 279_W 0.77 0.00
103_L 30_P 0.77 0.00
69_V 170_A 0.77 0.00
13_K 244_L 0.77 0.00
83_G 238_C 0.76 0.00
80_V 95_R 0.76 0.00
90_M 24_R 0.76 0.00
8_D 49_A 0.76 0.00
86_I 68_E 0.76 0.00
59_S 128_T 0.76 0.00
19_G 11_V 0.76 0.00
33_I 74_A 0.76 0.00
40_C 310_Y 0.75 0.00
67_L 24_R 0.75 0.00
38_I 2_K 0.75 0.00
83_G 77_D 0.75 0.00
7_Q 205_N 0.75 0.00
79_V 186_V 0.75 0.00
90_M 8_S 0.74 0.00
46_R 75_S 0.74 0.00
82_L 331_F 0.74 0.00
97_L 230_R 0.74 0.00
27_V 7_A 0.74 0.00
90_M 263_I 0.74 0.00
86_I 276_K 0.74 0.00
94_S 163_G 0.74 0.00
60_R 72_N 0.74 0.00
96_R 146_P 0.74 0.00
33_I 163_G 0.74 0.00
13_K 169_N 0.74 0.00
40_C 176_I 0.74 0.00
16_D 279_W 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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