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OPENSEQ.org
IOJAP - YHBY
UniProt: P0AAT6 - P0AGK4
Length: 202
Sequences: 249
Seq/Len: 1.26
I_Prob: 0.47
IOJAP - Ribosomal silencing factor RsfS
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IOJAP 		YHBY - RNA-binding protein YhbY
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YHBY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_G 66_I 1.72 0.47
22_I 34_L 1.46 0.27
85_V 84_L 1.30 0.17
7_Q 85_Y 1.24 0.14
86_I 66_I 1.23 0.14
18_K 67_V 1.19 0.12
56_V 32_G 1.17 0.11
94_S 88_T 1.11 0.09
48_V 76_Q 1.10 0.09
92_E 66_I 1.09 0.09
104_W 40_A 1.07 0.08
42_G 47_I 1.06 0.08
27_V 53_T 1.06 0.08
104_W 72_A 1.04 0.07
34_T 54_E 1.04 0.07
55_V 67_V 1.03 0.07
67_L 82_L 1.03 0.07
85_V 44_H 1.02 0.07
82_L 30_T 1.02 0.07
48_V 83_V 1.01 0.06
80_V 61_L 1.01 0.06
103_L 3_L 1.00 0.06
54_H 43_H 0.99 0.06
24_A 24_L 0.98 0.06
12_D 51_I 0.97 0.06
100_L 47_I 0.97 0.06
31_S 62_I 0.96 0.05
23_I 8_K 0.96 0.05
76_D 5_T 0.95 0.05
46_R 51_I 0.94 0.05
19_G 29_L 0.93 0.05
63_G 43_H 0.93 0.05
44_S 15_A 0.93 0.05
41_T 85_Y 0.93 0.05
24_A 89_K 0.93 0.04
16_D 72_A 0.92 0.04
80_V 89_K 0.92 0.04
59_S 15_A 0.92 0.04
60_R 57_E 0.91 0.04
54_H 27_N 0.91 0.04
75_A 44_H 0.91 0.04
80_V 65_A 0.90 0.04
20_Q 22_V 0.90 0.04
100_L 40_A 0.89 0.04
27_V 85_Y 0.89 0.04
35_D 58_T 0.88 0.04
8_D 34_L 0.88 0.04
53_D 41_L 0.88 0.04
102_K 67_V 0.87 0.04
62_A 73_C 0.86 0.04
17_L 85_Y 0.86 0.04
40_C 8_K 0.86 0.03
24_A 80_K 0.86 0.03
6_L 69_E 0.85 0.03
19_G 13_G 0.84 0.03
36_C 80_K 0.84 0.03
13_K 22_V 0.84 0.03
64_L 80_K 0.84 0.03
86_I 27_N 0.83 0.03
91_Q 36_E 0.83 0.03
39_I 77_V 0.83 0.03
47_H 50_K 0.82 0.03
14_I 8_K 0.82 0.03
19_G 92_K 0.82 0.03
79_V 58_T 0.82 0.03
87_V 61_L 0.82 0.03
83_G 29_L 0.81 0.03
41_T 22_V 0.81 0.03
84_D 89_K 0.81 0.03
57_Q 90_E 0.80 0.03
66_P 42_E 0.80 0.03
44_S 24_L 0.80 0.03
8_D 14_L 0.79 0.03
32_S 8_K 0.79 0.03
87_V 37_I 0.79 0.03
105_S 10_H 0.79 0.03
73_N 13_G 0.79 0.03
30_K 50_K 0.79 0.03
27_V 32_G 0.79 0.03
82_L 88_T 0.79 0.03
73_N 30_T 0.78 0.02
15_D 35_A 0.78 0.02
15_D 80_K 0.77 0.02
93_E 16_H 0.77 0.02
21_D 52_A 0.77 0.02
69_V 40_A 0.76 0.02
20_Q 7_Q 0.76 0.02
19_G 61_L 0.76 0.02
25_L 13_G 0.76 0.02
61_A 42_E 0.76 0.02
28_Q 60_T 0.75 0.02
18_K 14_L 0.75 0.02
41_T 23_L 0.75 0.02
88_H 95_L 0.75 0.02
78_I 19_K 0.75 0.02
31_S 57_E 0.74 0.02
52_A 34_L 0.74 0.02
32_S 83_V 0.74 0.02
19_G 46_L 0.74 0.02
65_L 64_E 0.74 0.02
16_D 55_D 0.74 0.02
102_K 19_K 0.74 0.02
52_A 22_V 0.73 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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