May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FABD - FABH
UniProt: P0AAI9 - P0A6R0
Length: 626
Sequences: 975
Seq/Len: 1.56
I_Prob: 0.00

FABD - Malonyl CoA-acyl carrier protein transacylase
Paralog alert: 0.33 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: FABD
FABH - 3-oxoacyl-[acyl-carrier-protein] synthase 3
Paralog alert: 0.51 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: FABH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
153_G 242_V 1.03 0.00
233_D 241_L 0.95 0.00
115_E 312_S 0.86 0.00
174_E 16_V 0.85 0.00
183_C 55_G 0.81 0.00
73_L 170_E 0.80 0.00
249_R 259_G 0.79 0.00
305_A 238_L 0.78 0.00
271_H 238_L 0.77 0.00
156_V 241_L 0.77 0.00
191_A 229_A 0.74 0.00
123_E 137_V 0.73 0.00
262_E 116_T 0.73 0.00
304_A 261_S 0.72 0.00
212_L 213_F 0.72 0.00
120_F 211_E 0.72 0.00
77_W 102_G 0.72 0.00
180_G 242_V 0.71 0.00
70_S 41_E 0.71 0.00
77_W 89_S 0.71 0.00
51_G 243_P 0.70 0.00
157_S 155_I 0.69 0.00
149_E 64_E 0.69 0.00
58_K 104_P 0.69 0.00
38_A 48_N 0.68 0.00
300_P 222_H 0.68 0.00
225_T 45_A 0.68 0.00
19_L 215_V 0.68 0.00
91_H 266_V 0.68 0.00
4_F 16_V 0.67 0.00
202_C 231_N 0.67 0.00
66_L 111_A 0.67 0.00
186_A 60_T 0.67 0.00
35_E 43_H 0.67 0.00
61_Q 84_T 0.67 0.00
80_Q 125_Y 0.67 0.00
170_A 59_A 0.66 0.00
27_P 57_E 0.66 0.00
286_K 76_I 0.66 0.00
136_I 279_S 0.66 0.00
141_A 233_L 0.66 0.00
48_T 251_I 0.66 0.00
230_N 314_L 0.66 0.00
118_G 208_A 0.65 0.00
257_W 253_A 0.65 0.00
27_P 71_D 0.64 0.00
172_H 65_M 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.7128 seconds.