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OPENSEQ.org

FABH - 3-oxoacyl-[acyl-carrier-protein] synthase 3
UniProt: P0A6R0 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10277
Length: 317 (316)
Sequences: 4628
Seq/Len: 14.65

FABH
Paralog alert: 0.51 [within 20: 0.07] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
56_F 97_M 3.996 1.00
133_Y 167_A 3.718 1.00
298_L 316_R 3.497 1.00
6_I 167_A 3.095 1.00
34_V 40_R 2.961 1.00
41_E 271_R 2.903 1.00
40_R 270_D 2.898 1.00
10_S 285_D 2.862 1.00
94_I 137_V 2.845 1.00
55_G 94_I 2.779 1.00
75_L 134_A 2.682 1.00
285_D 289_R 2.679 1.00
57_E 60_T 2.497 1.00
56_F 94_I 2.484 1.00
62_A 165_V 2.45 1.00
53_T 97_M 2.384 1.00
3_T 123_D 2.308 1.00
118_A 136_V 2.201 1.00
59_A 135_L 2.201 1.00
234_D 237_Q 2.162 1.00
122_A 134_A 2.156 1.00
11_Y 54_M 2.156 1.00
18_T 21_D 2.152 1.00
8_T 285_D 2.141 1.00
74_G 133_Y 2.134 1.00
239_D 297_Q 2.133 1.00
123_D 127_K 2.101 1.00
119_L 166_L 2.089 1.00
16_V 41_E 2.089 1.00
65_M 288_V 2.048 1.00
261_S 264_N 2.036 1.00
56_F 60_T 2.026 1.00
26_V 154_I 1.959 1.00
72_Q 133_Y 1.941 1.00
20_A 23_E 1.934 1.00
16_V 43_H 1.92 1.00
294_K 297_Q 1.909 1.00
275_T 282_C 1.868 1.00
69_E 72_Q 1.864 1.00
225_D 229_A 1.864 1.00
63_I 70_K 1.859 1.00
18_T 41_E 1.787 1.00
21_D 24_K 1.786 1.00
74_G 132_K 1.767 1.00
126_V 166_L 1.757 1.00
176_S 231_N 1.748 1.00
59_A 98_L 1.728 1.00
51_V 139_S 1.726 1.00
178_H 230_A 1.704 1.00
62_A 66_A 1.698 1.00
12_L 272_H 1.698 1.00
68_I 133_Y 1.688 1.00
79_A 118_A 1.687 1.00
271_R 286_E 1.683 1.00
52_S 84_T 1.668 1.00
248_L 252_S 1.666 1.00
60_T 64_E 1.662 1.00
301_L 315_V 1.652 1.00
255_A 262_M 1.651 1.00
267_V 270_D 1.646 1.00
233_L 237_Q 1.644 1.00
68_I 165_V 1.625 1.00
9_G 62_A 1.62 1.00
77_V 106_F 1.6 1.00
58_A 163_A 1.599 1.00
50_T 53_T 1.586 1.00
77_V 122_A 1.554 1.00
31_E 35_T 1.539 1.00
63_I 73_I 1.538 1.00
44_I 148_P 1.534 1.00
75_L 125_Y 1.533 1.00
17_R 44_I 1.499 1.00
233_L 298_L 1.492 1.00
227_T 312_S 1.482 1.00
7_G 65_M 1.481 1.00
208_A 211_E 1.463 1.00
61_R 65_M 1.456 1.00
61_R 64_E 1.447 1.00
231_N 314_L 1.442 1.00
175_I 316_R 1.423 1.00
251_I 265_V 1.422 1.00
266_V 283_A 1.419 1.00
227_T 314_L 1.419 1.00
68_I 72_Q 1.409 1.00
73_I 165_V 1.396 0.99
45_A 141_V 1.393 0.99
176_S 227_T 1.392 0.99
252_S 262_M 1.374 0.99
9_G 61_R 1.362 0.99
46_A 49_E 1.357 0.99
288_V 293_I 1.343 0.99
73_I 100_I 1.343 0.99
59_A 137_V 1.334 0.99
268_T 286_E 1.332 0.99
115_F 281_P 1.321 0.99
65_M 289_R 1.312 0.99
124_Q 128_S 1.31 0.99
57_E 61_R 1.306 0.99
100_I 103_C 1.305 0.99
239_D 298_L 1.3 0.99
122_A 166_L 1.298 0.99
115_F 164_A 1.288 0.99
178_H 226_E 1.287 0.99
240_W 297_Q 1.283 0.99
126_V 134_A 1.282 0.99
72_Q 132_K 1.276 0.99
55_G 139_S 1.271 0.99
113_A 309_T 1.269 0.99
78_V 90_A 1.257 0.99
225_D 235_R 1.257 0.99
173_G 316_R 1.255 0.99
295_P 317_F 1.252 0.99
223_I 312_S 1.251 0.99
176_S 230_A 1.231 0.98
139_S 161_A 1.226 0.98
60_T 70_K 1.22 0.98
106_F 121_V 1.216 0.98
63_I 68_I 1.212 0.98
7_G 165_V 1.211 0.98
7_G 66_A 1.209 0.98
30_D 34_V 1.207 0.98
248_L 267_V 1.207 0.98
56_F 98_L 1.201 0.98
10_S 282_C 1.197 0.98
240_W 292_R 1.175 0.98
76_I 100_I 1.175 0.98
15_Q 21_D 1.171 0.98
108_V 121_V 1.149 0.97
14_E 49_E 1.142 0.97
74_G 131_V 1.139 0.97
71_D 101_K 1.135 0.97
228_L 235_R 1.126 0.97
238_L 300_L 1.126 0.97
10_S 289_R 1.124 0.97
162_G 281_P 1.123 0.97
141_V 144_R 1.118 0.96
222_H 226_E 1.108 0.96
61_R 285_D 1.104 0.96
244_H 274_N 1.085 0.96
131_V 134_A 1.084 0.96
148_P 154_I 1.074 0.95
70_K 100_I 1.074 0.95
266_V 287_A 1.072 0.95
7_G 62_A 1.071 0.95
52_S 90_A 1.064 0.95
4_K 169_S 1.06 0.95
111_A 306_G 1.057 0.95
242_V 283_A 1.056 0.95
54_M 141_V 1.053 0.95
136_V 166_L 1.047 0.94
76_I 95_Q 1.046 0.94
77_V 134_A 1.039 0.94
226_E 229_A 1.038 0.94
122_A 136_V 1.027 0.94
20_A 24_K 1.017 0.93
81_T 111_A 1.008 0.93
124_Q 130_A 1.006 0.93
178_H 312_S 1 0.92
135_L 165_V 1 0.92
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
3il3A10.99371000.218Contact Map0.869
4ewpA60.99681000.233Contact Map0.827
3gwaA211000.234Contact Map0.835
2f82A10.95581000.246Contact Map0.668
1hnjA10.99681000.247Contact Map0.843
4efiA111000.248Contact Map0.728
4dfeA411000.25Contact Map0.872
3euoA20.97481000.252Contact Map0.711
1zowA40.97791000.254Contact Map0.897
3il6A10.98111000.257Contact Map0.83

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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