May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PPNK - RECN
UniProt: P0A7B3 - P05824
Length: 845
Sequences: 670
Seq/Len: 0.80
I_Prob: 0.01
PPNK - Probable inorganic polyphosphate/ATP-NAD kinase
Paralog alert: 0.07 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PPNK 		RECN - DNA repair protein RecN
Paralog alert: 0.01 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RECN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
93_I 88_G 1.57 0.01
229_I 502_H 1.39 0.01
123_S 443_I 1.36 0.01
174_Q 505_V 1.33 0.01
222_V 42_L 1.30 0.01
182_S 256_L 1.27 0.01
93_I 168_Q 1.25 0.01
167_D 105_G 1.18 0.01
26_L 499_G 1.17 0.01
161_E 461_V 1.16 0.00
220_P 106_F 1.15 0.00
93_I 525_A 1.14 0.00
93_I 338_D 1.14 0.00
191_S 466_S 1.12 0.00
77_L 412_I 1.11 0.00
182_S 254_S 1.11 0.00
93_I 514_T 1.11 0.00
90_V 112_V 1.11 0.00
93_I 530_L 1.10 0.00
220_P 104_R 1.09 0.00
182_S 266_V 1.09 0.00
182_S 153_T 1.08 0.00
121_Y 349_A 1.07 0.00
148_E 38_A 1.07 0.00
102_T 410_D 1.07 0.00
287_W 106_F 1.06 0.00
287_W 104_R 1.06 0.00
77_L 142_Q 1.06 0.00
269_L 189_L 1.06 0.00
174_Q 318_S 1.06 0.00
105_D 469_T 1.05 0.00
220_P 466_S 1.05 0.00
158_H 25_T 1.05 0.00
281_L 465_I 1.04 0.00
166_I 524_K 1.04 0.00
120_H 290_R 1.03 0.00
194_A 4_Q 1.03 0.00
213_P 108_N 1.02 0.00
258_V 384_H 1.01 0.00
69_V 109_G 1.00 0.00
93_I 85_L 1.00 0.00
46_E 277_I 1.00 0.00
277_Y 106_F 1.00 0.00
123_S 18_I 0.99 0.00
232_R 516_T 0.99 0.00
154_G 511_G 0.99 0.00
176_S 465_I 0.99 0.00
220_P 533_L 0.99 0.00
182_S 342_S 0.99 0.00
263_C 151_N 0.99 0.00
269_L 515_E 0.99 0.00
128_L 36_S 0.99 0.00
227_S 7_I 0.99 0.00
123_S 194_L 0.99 0.00
95_R 322_L 0.99 0.00
137_D 209_Q 0.98 0.00
114_A 162_R 0.98 0.00
260_I 86_E 0.97 0.00
146_I 440_A 0.97 0.00
211_M 489_V 0.97 0.00
90_V 454_P 0.97 0.00
98_L 131_H 0.97 0.00
109_A 518_M 0.96 0.00
217_S 79_W 0.96 0.00
70_V 308_Q 0.96 0.00
127_F 378_L 0.95 0.00
277_Y 440_A 0.95 0.00
208_L 14_R 0.95 0.00
246_S 476_L 0.94 0.00
75_N 38_A 0.94 0.00
17_P 295_P 0.94 0.00
145_A 142_Q 0.94 0.00
252_I 504_F 0.94 0.00
106_P 516_T 0.94 0.00
182_S 114_L 0.94 0.00
10_I 339_Q 0.93 0.00
161_E 495_V 0.93 0.00
118_E 356_Q 0.93 0.00
137_D 107_I 0.93 0.00
10_I 229_N 0.93 0.00
19_A 342_S 0.93 0.00
209_V 312_A 0.93 0.00
215_T 499_G 0.93 0.00
171_A 437_S 0.93 0.00
88_I 534_L 0.92 0.00
77_L 234_M 0.92 0.00
103_D 530_L 0.92 0.00
242_I 153_T 0.92 0.00
181_I 399_F 0.92 0.00
182_S 229_N 0.92 0.00
221_L 295_P 0.91 0.00
145_A 470_A 0.91 0.00
66_L 495_V 0.91 0.00
231_L 550_L 0.91 0.00
93_I 423_P 0.91 0.00
90_V 28_T 0.91 0.00
129_L 370_Q 0.91 0.00
191_S 49_R 0.91 0.00
70_V 84_Q 0.90 0.00
164_V 521_L 0.90 0.00
77_L 546_N 0.90 0.00
101_L 24_M 0.90 0.00
209_V 505_V 0.90 0.00
155_K 5_L 0.90 0.00
231_L 165_L 0.90 0.00
117_L 94_R 0.89 0.00
10_I 164_Q 0.89 0.00
64_A 477_L 0.89 0.00
102_T 469_T 0.89 0.00
229_I 242_L 0.89 0.00
69_V 437_S 0.89 0.00
159_M 493_P 0.88 0.00
199_L 411_R 0.88 0.00
123_S 383_M 0.88 0.00
118_E 158_E 0.88 0.00
102_T 54_M 0.88 0.00
93_I 119_E 0.88 0.00
127_F 16_L 0.88 0.00
133_V 258_G 0.88 0.00
127_F 7_I 0.88 0.00
213_P 107_I 0.88 0.00
132_Q 502_H 0.88 0.00
182_S 209_Q 0.88 0.00
219_R 531_A 0.87 0.00
181_I 339_Q 0.87 0.00
90_V 484_T 0.87 0.00
150_V 36_S 0.87 0.00
102_T 38_A 0.87 0.00
116_V 133_H 0.87 0.00
5_F 505_V 0.87 0.00
219_R 273_A 0.87 0.00
70_V 263_L 0.87 0.00
140_K 287_Y 0.87 0.00
223_I 41_A 0.86 0.00
280_T 440_A 0.86 0.00
30_L 477_L 0.86 0.00
110_Q 395_I 0.86 0.00
238_N 246_L 0.86 0.00
28_R 268_D 0.86 0.00
67_A 436_L 0.86 0.00
168_E 391_G 0.86 0.00
148_E 533_L 0.86 0.00
126_R 496_A 0.86 0.00
180_I 199_E 0.85 0.00
181_I 281_S 0.85 0.00
149_V 428_A 0.85 0.00
149_V 112_V 0.85 0.00
269_L 519_Q 0.85 0.00
97_N 207_F 0.85 0.00
231_L 102_R 0.85 0.00
222_V 533_L 0.85 0.00
92_G 494_Q 0.85 0.00
162_F 516_T 0.85 0.00
80_A 263_L 0.85 0.00
103_D 66_A 0.85 0.00
269_L 223_L 0.84 0.00
118_E 406_A 0.84 0.00
258_V 415_R 0.84 0.00
220_P 52_A 0.84 0.00
97_N 38_A 0.84 0.00
75_N 415_R 0.84 0.00
215_T 102_R 0.84 0.00
281_L 474_G 0.84 0.00
77_L 551_L 0.83 0.00
102_T 278_A 0.83 0.00
212_F 316_H 0.83 0.00
103_D 44_L 0.83 0.00
123_S 161_A 0.83 0.00
23_H 390_H 0.83 0.00
103_D 207_F 0.83 0.00
68_V 428_A 0.83 0.00
164_V 456_L 0.83 0.00
221_L 270_L 0.83 0.00
174_Q 534_L 0.82 0.00
282_S 387_S 0.82 0.00
183_T 91_C 0.82 0.00
274_D 279_E 0.82 0.00
151_L 149_Y 0.82 0.00
93_I 550_L 0.82 0.00
223_I 90_E 0.82 0.00
120_H 331_E 0.82 0.00
101_L 98_S 0.82 0.00
226_S 249_A 0.82 0.00
209_V 474_G 0.82 0.00
103_D 63_D 0.82 0.00
115_D 210_I 0.82 0.00
229_I 2_L 0.82 0.00
231_L 235_A 0.82 0.00
243_S 516_T 0.82 0.00
90_V 397_V 0.82 0.00
184_P 474_G 0.82 0.00
282_S 80_L 0.81 0.00
126_R 490_T 0.81 0.00
255_G 474_G 0.81 0.00
279_N 502_H 0.81 0.00
17_P 213_E 0.81 0.00
206_I 114_L 0.81 0.00
133_V 42_L 0.81 0.00
182_S 225_T 0.81 0.00
36_E 208_E 0.81 0.00
13_H 104_R 0.81 0.00
286_G 38_A 0.81 0.00
91_I 62_A 0.81 0.00
182_S 239_D 0.81 0.00
268_N 209_Q 0.81 0.00
8_I 166_W 0.81 0.00
93_I 171_R 0.81 0.00
179_L 551_L 0.81 0.00
8_I 505_V 0.81 0.00
189_A 234_M 0.81 0.00
169_I 284_L 0.80 0.00
208_L 197_L 0.80 0.00
181_I 313_R 0.80 0.00
93_I 502_H 0.80 0.00
209_V 480_L 0.80 0.00
128_L 25_T 0.80 0.00
91_I 149_Y 0.80 0.00
229_I 161_A 0.80 0.00
126_R 30_E 0.80 0.00
158_H 189_L 0.80 0.00
282_S 145_L 0.80 0.00
252_I 411_R 0.80 0.00
227_S 61_R 0.80 0.00
285_L 94_R 0.80 0.00
130_E 281_S 0.79 0.00
226_S 370_Q 0.79 0.00
137_D 19_D 0.79 0.00
29_W 49_R 0.79 0.00
109_A 201_N 0.79 0.00
113_L 450_K 0.79 0.00
67_A 473_V 0.79 0.00
167_D 283_E 0.79 0.00
159_M 495_V 0.79 0.00
235_H 406_A 0.79 0.00
226_S 525_A 0.79 0.00
280_T 550_L 0.79 0.00
112_Q 186_R 0.79 0.00
131_A 45_C 0.79 0.00
25_M 499_G 0.79 0.00
164_V 340_A 0.79 0.00
102_T 26_V 0.79 0.00
37_V 167_H 0.79 0.00
264_D 59_A 0.78 0.00
130_E 115_S 0.78 0.00
113_L 2_L 0.78 0.00
124_E 45_C 0.78 0.00
124_E 167_H 0.78 0.00
212_F 419_N 0.78 0.00
220_P 526_R 0.78 0.00
223_I 114_L 0.78 0.00
155_K 395_I 0.78 0.00
93_I 120_L 0.78 0.00
102_T 10_F 0.78 0.00
85_R 425_Q 0.78 0.00
18_T 376_A 0.78 0.00
152_H 91_C 0.78 0.00
76_M 318_S 0.78 0.00
59_E 522_N 0.78 0.00
142_I 443_I 0.78 0.00
183_T 107_I 0.78 0.00
31_C 81_E 0.78 0.00
121_Y 448_A 0.77 0.00
220_P 551_L 0.77 0.00
181_I 140_E 0.77 0.00
276_S 131_H 0.77 0.00
209_V 444_Q 0.77 0.00
148_E 12_I 0.77 0.00
145_A 549_E 0.77 0.00
88_I 58_G 0.77 0.00
285_L 36_S 0.77 0.00
38_I 60_A 0.77 0.00
276_S 332_E 0.77 0.00
191_S 429_K 0.77 0.00
69_V 490_T 0.77 0.00
211_M 502_H 0.77 0.00
93_I 324_Q 0.77 0.00
13_H 495_V 0.77 0.00
159_M 445_V 0.77 0.00
103_D 440_A 0.77 0.00
226_S 271_E 0.77 0.00
148_E 382_S 0.77 0.00
181_I 27_I 0.77 0.00
26_L 155_L 0.77 0.00
30_L 263_L 0.76 0.00
226_S 19_D 0.76 0.00
212_F 444_Q 0.76 0.00
93_I 163_Y 0.76 0.00
235_H 100_D 0.76 0.00
108_N 454_P 0.76 0.00
214_H 494_Q 0.76 0.00
137_D 501_Q 0.76 0.00
278_F 36_S 0.76 0.00
111_Q 522_N 0.76 0.00
192_L 476_L 0.76 0.00
68_V 205_G 0.76 0.00
13_H 471_A 0.76 0.00
69_V 44_L 0.76 0.00
168_E 184_A 0.76 0.00
263_C 517_H 0.76 0.00
205_A 120_L 0.76 0.00
174_Q 440_A 0.76 0.00
151_L 289_D 0.76 0.00
77_L 124_L 0.76 0.00
93_I 9_N 0.76 0.00
38_I 49_R 0.76 0.00
138_C 406_A 0.76 0.00
208_L 454_P 0.76 0.00
209_V 445_V 0.75 0.00
145_A 103_S 0.75 0.00
286_G 410_D 0.75 0.00
20_L 552_A 0.75 0.00
104_L 448_A 0.75 0.00
36_E 22_S 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 1.7044 seconds.