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OPENSEQ.org

AROK - HOFN
UniProt: P0A6D7 - P64634
Length: 352
Sequences: 235
Seq/Len: 0.69
I_Prob: 0.02

AROK - Shikimate kinase 1
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: AROK AROL
HOFN - Putative DNA utilization protein HofN
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HOFN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_P 10_W 1.65 0.02
116_R 10_W 1.31 0.01
10_V 137_L 1.30 0.01
148_A 107_P 1.25 0.01
110_Q 10_W 1.23 0.01
40_E 141_L 1.22 0.01
50_V 138_E 1.19 0.01
109_K 99_L 1.19 0.01
108_E 36_I 1.19 0.01
20_I 122_L 1.18 0.01
66_V 5_I 1.16 0.01
12_P 86_Q 1.15 0.00
10_V 145_A 1.15 0.00
142_P 101_A 1.14 0.00
38_E 139_T 1.14 0.00
66_V 157_Q 1.13 0.00
110_Q 86_Q 1.10 0.00
49_W 117_W 1.10 0.00
67_I 45_S 1.06 0.00
45_A 132_T 1.06 0.00
47_V 92_T 1.05 0.00
10_V 141_L 1.05 0.00
129_P 126_G 1.05 0.00
160_K 10_W 1.05 0.00
77_V 61_L 1.04 0.00
47_V 50_I 1.04 0.00
12_P 90_Q 1.04 0.00
67_I 24_L 1.03 0.00
58_G 10_W 1.02 0.00
10_V 13_Q 1.02 0.00
67_I 63_R 1.01 0.00
66_V 85_R 1.01 0.00
50_V 96_Q 1.01 0.00
105_T 162_R 1.00 0.00
20_I 98_A 1.00 0.00
50_V 4_P 1.00 0.00
45_A 10_W 1.00 0.00
159_A 155_T 1.00 0.00
142_P 15_R 0.99 0.00
45_A 117_W 0.99 0.00
43_T 132_T 0.99 0.00
85_V 35_G 0.98 0.00
7_I 17_A 0.97 0.00
49_W 10_W 0.97 0.00
85_V 81_Q 0.97 0.00
70_L 111_W 0.97 0.00
159_A 94_D 0.96 0.00
119_K 66_Q 0.96 0.00
13_M 66_Q 0.95 0.00
45_A 83_S 0.95 0.00
48_G 4_P 0.95 0.00
12_P 15_R 0.94 0.00
79_A 85_R 0.94 0.00
106_T 46_A 0.94 0.00
99_V 111_W 0.94 0.00
151_T 54_L 0.94 0.00
57_E 67_I 0.94 0.00
57_E 82_R 0.94 0.00
138_N 152_R 0.93 0.00
146_E 68_T 0.93 0.00
90_T 22_W 0.93 0.00
71_T 105_L 0.93 0.00
37_Q 69_K 0.92 0.00
166_I 36_I 0.92 0.00
10_V 29_P 0.92 0.00
77_V 124_I 0.91 0.00
12_P 89_R 0.91 0.00
163_A 114_T 0.91 0.00
47_V 135_N 0.91 0.00
7_I 125_K 0.91 0.00
152_I 109_H 0.90 0.00
152_I 100_E 0.90 0.00
172_S 92_T 0.90 0.00
26_Q 27_V 0.90 0.00
31_E 108_E 0.89 0.00
41_K 18_F 0.89 0.00
52_D 108_E 0.88 0.00
115_Q 99_L 0.88 0.00
18_S 4_P 0.88 0.00
62_R 83_S 0.88 0.00
31_E 39_I 0.87 0.00
137_A 71_R 0.87 0.00
150_V 169_L 0.87 0.00
43_T 8_L 0.87 0.00
124_H 75_Q 0.86 0.00
50_V 66_Q 0.86 0.00
147_I 160_Q 0.86 0.00
102_Y 54_L 0.86 0.00
9_L 11_R 0.86 0.00
41_K 76_Q 0.86 0.00
41_K 2_N 0.86 0.00
138_N 171_R 0.86 0.00
35_S 88_Q 0.85 0.00
146_E 60_Q 0.85 0.00
136_L 126_G 0.85 0.00
47_V 111_W 0.85 0.00
79_A 112_L 0.85 0.00
106_T 99_L 0.85 0.00
163_A 13_Q 0.85 0.00
37_Q 22_W 0.85 0.00
98_G 63_R 0.85 0.00
151_T 16_T 0.85 0.00
46_D 10_W 0.84 0.00
35_S 169_L 0.84 0.00
151_T 102_L 0.83 0.00
76_I 25_M 0.83 0.00
12_P 105_L 0.83 0.00
153_R 124_I 0.83 0.00
43_T 115_I 0.83 0.00
163_A 135_N 0.83 0.00
150_V 116_S 0.83 0.00
18_S 51_D 0.82 0.00
69_E 61_L 0.82 0.00
69_E 106_L 0.82 0.00
95_S 26_F 0.82 0.00
108_E 108_E 0.82 0.00
94_L 108_E 0.82 0.00
143_L 165_F 0.82 0.00
150_V 138_E 0.82 0.00
24_L 11_R 0.82 0.00
50_V 83_S 0.82 0.00
102_Y 50_I 0.82 0.00
110_Q 160_Q 0.82 0.00
66_V 54_L 0.81 0.00
45_A 40_L 0.81 0.00
128_P 103_A 0.81 0.00
18_S 148_H 0.81 0.00
72_E 71_R 0.81 0.00
39_I 11_R 0.81 0.00
71_T 52_A 0.81 0.00
30_M 110_A 0.81 0.00
18_S 122_L 0.81 0.00
148_A 2_N 0.81 0.00
69_E 144_D 0.80 0.00
69_E 85_R 0.80 0.00
69_E 128_T 0.80 0.00
96_A 27_V 0.80 0.00
49_W 40_L 0.80 0.00
116_R 20_R 0.80 0.00
69_E 154_A 0.80 0.00
125_V 171_R 0.80 0.00
108_E 113_T 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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