May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PYRC - PYRD
UniProt: P05020 - P0A7E1
Length: 684
Sequences: 521
Seq/Len: 0.85
I_Prob: 0.00

PYRC - Dihydroorotase
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PYRC
PYRD - Dihydroorotate dehydrogenase (quinone)
Paralog alert: 0.39 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PYRD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
203_H 113_M 1.37 0.00
301_P 112_R 1.08 0.00
188_V 252_S 1.04 0.00
298_V 271_L 1.04 0.00
220_L 241_G 0.99 0.00
134_G 163_Y 0.98 0.00
230_I 236_R 0.96 0.00
207_N 124_V 0.96 0.00
279_Y 49_C 0.95 0.00
136_P 53_T 0.95 0.00
239_V 264_G 0.94 0.00
294_A 52_L 0.93 0.00
101_A 242_V 0.93 0.00
165_L 319_S 0.92 0.00
40_A 53_T 0.92 0.00
28_T 299_D 0.90 0.00
293_E 317_I 0.90 0.00
64_L 192_D 0.90 0.00
101_A 271_L 0.89 0.00
155_A 50_M 0.88 0.00
234_A 298_I 0.88 0.00
165_L 229_Q 0.88 0.00
56_A 276_T 0.88 0.00
200_T 113_M 0.87 0.00
278_S 260_C 0.87 0.00
334_V 219_A 0.86 0.00
14_D 186_Y 0.86 0.00
24_D 248_T 0.85 0.00
41_I 191_D 0.85 0.00
119_S 244_A 0.84 0.00
101_A 140_I 0.84 0.00
319_E 292_I 0.84 0.00
222_C 232_D 0.84 0.00
34_S 317_I 0.83 0.00
133_I 317_I 0.83 0.00
288_A 332_I 0.82 0.00
229_N 298_I 0.82 0.00
322_V 188_E 0.81 0.00
50_V 60_L 0.81 0.00
313_I 133_D 0.81 0.00
233_Q 157_I 0.81 0.00
158_I 169_I 0.81 0.00
44_P 276_T 0.81 0.00
37_Y 133_D 0.81 0.00
184_A 98_P 0.81 0.00
199_I 113_M 0.81 0.00
165_L 81_S 0.81 0.00
175_V 88_T 0.80 0.00
196_A 216_V 0.80 0.00
136_P 193_L 0.80 0.00
85_L 49_C 0.80 0.00
188_V 253_L 0.80 0.00
37_Y 168_Y 0.79 0.00
182_K 242_V 0.79 0.00
157_F 319_S 0.79 0.00
316_V 91_P 0.79 0.00
199_I 173_I 0.79 0.00
48_P 119_G 0.79 0.00
325_S 300_S 0.79 0.00
18_L 51_G 0.78 0.00
187_Y 120_V 0.77 0.00
334_V 277_E 0.77 0.00
159_E 138_I 0.77 0.00
72_D 90_R 0.77 0.00
32_Y 276_T 0.77 0.00
200_T 272_Q 0.76 0.00
21_R 111_N 0.76 0.00
293_E 134_G 0.76 0.00
276_L 304_A 0.76 0.00
119_S 331_E 0.76 0.00
211_M 138_I 0.76 0.00
234_A 233_S 0.76 0.00
59_Y 116_N 0.75 0.00
66_A 298_I 0.75 0.00
296_C 294_G 0.75 0.00
292_F 336_I 0.75 0.00
203_H 131_H 0.75 0.00
173_K 193_L 0.74 0.00
177_E 140_I 0.74 0.00
52_T 124_V 0.74 0.00
287_N 335_H 0.74 0.00
158_I 244_A 0.74 0.00
122_A 300_S 0.74 0.00
18_L 336_I 0.73 0.00
204_L 197_I 0.73 0.00
96_E 255_Q 0.73 0.00
217_R 159_M 0.73 0.00
14_D 251_R 0.73 0.00
316_V 307_K 0.73 0.00
176_F 106_A 0.73 0.00
262_S 219_A 0.73 0.00
256_A 229_Q 0.73 0.00
289_L 88_T 0.72 0.00
302_Q 335_H 0.72 0.00
301_P 281_R 0.72 0.00
68_P 300_S 0.72 0.00
226_L 187_G 0.72 0.00
177_E 173_I 0.72 0.00
269_C 212_V 0.72 0.00
211_M 316_Q 0.72 0.00
206_F 279_I 0.71 0.00
305_G 107_E 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.1442 seconds.