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Coupling matrix for [S:0008] and [Q:0012]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 0.1 -0.6 0.1 -0.5 -0.1 0.7 0.5 0.2 0.1 -0.3 0 0.6 0 -0.1 0.1 0.1 0.7 -0.7 -0.4
F -0.7 0.9 -0.6 0.3 -0.8 0.2 -0.3 -0.2 -1 -0.4 0.6 0.8 -0.1 0.5 1.1 -0.1 -0.1 0.2 -0.8 -0.2
I -0.7 0.1 0.1 -0.2 0 -0.2 0.9 0.6 -0.5 0.3 0.4 0.1 -0.1 0.3 -0.3 -0.3 -0.4 -0.4 -0.2 -0.1
L -0.4 0.8 -0.3 0 -0.6 0.1 -0.2 0.7 -0.7 -0.1 0.1 0.4 0.1 -0.1 0 0.2 0.1 -0.2 0.1 0.3
V -0.3 0.5 0.6 -0.3 -0.6 0.3 0.6 0.8 -0.8 0.4 0.2 -0.1 0.7 -0.6 0.1 -0.3 -0.3 -0.5 -0.1 -0.1
M -0.2 0.1 0.3 0.4 0 0.4 0.4 -0.2 -0.4 -0.1 0.1 0 -0.2 0 -0.4 0.2 -0.2 -0.1 0 -0.1
W -0.6 -0.2 0.1 0.2 -0.3 -0.3 -0.1 0.1 -0.3 -0.1 -0.3 0.3 0.9 -0.2 0.4 -0.7 -0.2 0 -0.2 0.2
Y -0.7 -0.7 0.5 1 0.6 0.7 -0.4 -0.5 -0.8 -0.5 0.6 0 0.1 -0.2 0.3 0.2 0.4 -0.8 -0.3 0.1
D 0.2 -0.1 -0.3 -0.1 0.1 -0.6 -0.3 0.2 1.1 -0.1 0.2 0.1 0 0 -0.1 0.3 -0.1 0.1 0.5 0.1
E 0.3 -0.1 0.3 -0.2 -0.1 -0.5 -0.1 0.1 -0.2 -0.2 0.4 0.2 -0.1 0.2 -0.2 0.1 -0.1 -0.2 1.6 0.2
K 0.2 0.3 0.7 0.3 0.1 0.2 -0.3 0.1 1.2 0.8 -0.1 -0.7 -0.5 0.3 0 0.3 0 -0.3 -0.8 -0.6
R 0.6 0 0.3 0.3 0.2 0.1 -0.3 -0.4 0.7 0.7 -0.6 -0.3 -0.1 0.2 -0.3 -0.1 -0.1 0.2 0.5 -0.6
H 0.3 -0.4 0.3 0.7 1 -0.2 -0.2 -0.8 -0.3 -0.2 -0.4 -0.3 -0.2 -0.6 0.3 0.2 0.3 -0.4 0.5 0.4
N 0 -0.6 0.1 0.3 -0.2 -0.2 -0.3 0 0.7 0.3 0.3 -0.1 -0.3 0.2 0.2 0.7 0.2 -0.2 -0.5 -0.1
Q 0.3 -0.2 -0.3 0.1 0 0 -0.1 -0.3 0.9 0.3 -0.1 -0.2 0.2 0.4 0 0.2 0.4 -0.2 -0.2 -0.5
S 0.4 0.1 -0.5 -0.5 -0.1 0 -0.7 0.1 0.3 0.1 0.2 0 -0.3 0.2 -0.1 0.4 0.1 0.4 0 0.1
T 0.3 0 0.2 0 0.1 -0.2 -0.6 -0.1 -0.2 -0.1 0 0.1 0.2 0.4 0.2 0 0.2 0.1 0.6 -0.2
G 1 -0.6 -0.1 -0.5 1.4 0.2 -0.2 -0.8 0.2 0.1 0.1 0.3 -0.5 -0.5 -0.1 0.2 0.2 0.4 -0.5 -0.2
P 0.4 -0.1 -0.2 0.4 -0.1 0.1 0.2 -0.2 -0.3 -0.2 -0.5 0.5 -0.2 -0.2 0 -0.4 -0.2 -0.2 -0.1 0
C 0.1 -0.1 -0.3 -0.5 -0.1 -0.3 -0.1 0.2 0.1 0.1 0.1 0.1 -0.2 -0.2 -0.1 0 0 0.1 -0.2 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0008 1.2 -0.9 0.1 0.8 0.2 -0.3 -1.6 -0.5 0.8 1.8 1.4 1.2 0.1 0.2 1.1 0.7 0.6 -0.5 -2.1 -1.8
0012 1.4 -0.9 0 0.8 -0.4 -0.1 -2 -0.6 0.1 1.4 1.6 1.5 -0.3 0.5 0.9 0.8 -0.1 -0.3 -1.7 -2.1
Select residue pair below:
i_j Score Prob
0010_0035 3.858 1.00
0023_0051 2.560 1.00
0018_0028 2.182 1.00
0009_0012 2.103 1.00
0030_0034 1.909 1.00
0028_0032 1.809 1.00
0009_0013 1.778 1.00
0033_0038 1.665 1.00
0019_0023 1.632 1.00
0018_0022 1.463 1.00
0015_0051 1.463 1.00
0008_0012 1.456 1.00
0032_0036 1.385 0.99
0017_0032 1.383 0.99
0029_0032 1.371 0.99
0034_0044 1.364 0.99
0015_0019 1.354 0.99
0044_0047 1.339 0.99
0015_0023 1.330 0.99
0024_0051 1.321 0.99
0005_0008 1.312 0.99
0020_0031 1.269 0.99
0016_0019 1.255 0.99
0026_0044 1.246 0.98
0033_0039 1.194 0.98
0005_0058 1.186 0.98
0020_0052 1.140 0.97
0029_0033 1.125 0.97
0007_0035 1.078 0.95
0005_0009 1.057 0.95
0030_0033 1.045 0.94
0042_0060 1.043 0.94
0026_0030 1.029 0.94
0009_0054 1.025 0.93
0046_0050 0.989 0.92
0055_0058 0.989 0.92
0007_0011 0.984 0.92
0054_0058 0.956 0.90
0049_0056 0.898 0.86
0024_0048 0.893 0.85
0009_0058 0.891 0.85
0041_0044 0.855 0.82
0040_0043 0.851 0.81
0007_0017 0.842 0.80
0001_0037 0.839 0.80
0030_0039 0.834 0.79
0046_0056 0.833 0.79
0021_0028 0.789 0.74
0017_0028 0.786 0.74
0057_0061 0.783 0.73
0015_0020 0.780 0.73
0003_0037 0.771 0.71
0019_0022 0.759 0.70
0042_0045 0.753 0.69
0027_0030 0.743 0.67
0045_0049 0.740 0.67
0008_0011 0.712 0.63
0009_0052 0.698 0.60
0054_0059 0.692 0.59
0045_0056 0.690 0.59
0042_0046 0.687 0.58
0042_0056 0.686 0.58
0013_0053 0.686 0.58
0056_0060 0.684 0.58
0021_0031 0.681 0.57
0026_0047 0.676 0.57
0027_0033 0.675 0.56
0047_0051 0.674 0.56
0026_0031 0.672 0.56
0045_0060 0.671 0.56
0020_0051 0.667 0.55
0025_0047 0.666 0.55
0049_0055 0.650 0.52
0004_0008 0.647 0.52
0024_0044 0.644 0.51
0001_0004 0.641 0.51
0017_0035 0.629 0.49
0004_0037 0.627 0.48
0033_0036 0.617 0.47
0050_0062 0.607 0.45
0006_0048 0.602 0.44
0043_0047 0.594 0.43
0049_0059 0.581 0.40
0058_0061 0.580 0.40
0021_0024 0.576 0.40
0030_0044 0.557 0.37
0031_0034 0.556 0.36
0013_0052 0.556 0.36
0034_0048 0.536 0.33
0010_0017 0.533 0.33
0049_0054 0.531 0.33
0003_0007 0.528 0.32
Local Interactions:
i_j Score Prob
0061_0062 2.279 1.00
0055_0057 1.391 0.99
0024_0026 1.335 0.99
0028_0029 1.331 0.99
0013_0015 1.292 0.99
0036_0038 1.269 0.99
0037_0038 1.260 0.99
0027_0029 1.134 0.97
0055_0056 1.046 0.94
0012_0013 1.045 0.94
0051_0052 0.992 0.92
0054_0055 0.975 0.91
0022_0023 0.966 0.91
0008_0009 0.938 0.89
0003_0004 0.894 0.85
0039_0040 0.834 0.79
0043_0044 0.826 0.79
0016_0018 0.809 0.77
0027_0028 0.796 0.75
0056_0057 0.784 0.73
0002_0003 0.778 0.72
0058_0059 0.747 0.68
0041_0043 0.719 0.64
0018_0019 0.719 0.64
0038_0039 0.688 0.59
0041_0042 0.686 0.58
0013_0014 0.672 0.56
0040_0041 0.599 0.43
0019_0020 0.590 0.42
0017_0018 0.579 0.40
0052_0053 0.577 0.40
0042_0043 0.571 0.39
0023_0024 0.551 0.36
0026_0027 0.530 0.32
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: S I S S R ...
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