| UniProt: | P0A703 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11804 | ||
| Length: | 113 (113) | ||
| Sequences: | 782 | ||
| Seq/Len: | 6.92 |
| HYBF
Paralog alert: 0.48 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: HYBF HYPA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 48_F | 62_L | 2.961 | 1.00 | |
| 48_F | 60_C | 2.643 | 1.00 | |
| 75_D | 96_R | 2.522 | 1.00 | |
| 23_V | 112_V | 2.455 | 1.00 | |
| 32_E | 106_I | 2.345 | 1.00 | |
| 28_A | 63_H | 2.196 | 1.00 | |
| 32_E | 65_V | 2.101 | 1.00 | |
| 28_A | 61_D | 2.071 | 1.00 | |
| 72_W | 98_R | 1.977 | 1.00 | |
| 72_W | 79_V | 1.974 | 1.00 | |
| 17_Q | 20_Q | 1.931 | 1.00 | |
| 32_E | 108_K | 1.92 | 1.00 | |
| 72_W | 77_S | 1.879 | 1.00 | |
| 14_I | 26_V | 1.872 | 1.00 | |
| 27_T | 113_E | 1.811 | 1.00 | |
| 54_G | 58_Q | 1.676 | 1.00 | |
| 52_C | 59_G | 1.664 | 1.00 | |
| 6_L | 39_V | 1.654 | 1.00 | |
| 18_A | 56_V | 1.619 | 1.00 | |
| 35_A | 66_Y | 1.6 | 1.00 | |
| 14_I | 110_I | 1.598 | 1.00 | |
| 71_A | 80_V | 1.568 | 1.00 | |
| 78_Q | 91_L | 1.549 | 0.99 | |
| 7_C | 44_V | 1.544 | 0.99 | |
| 70_Q | 101_T | 1.532 | 0.99 | |
| 9_S | 13_I | 1.528 | 0.99 | |
| 30_W | 109_S | 1.498 | 0.99 | |
| 43_A | 46_F | 1.464 | 0.99 | |
| 70_Q | 79_V | 1.455 | 0.99 | |
| 18_A | 23_V | 1.435 | 0.99 | |
| 74_W | 98_R | 1.435 | 0.99 | |
| 55_T | 58_Q | 1.432 | 0.99 | |
| 35_A | 68_P | 1.41 | 0.99 | |
| 71_A | 97_L | 1.398 | 0.99 | |
| 6_L | 38_C | 1.381 | 0.99 | |
| 107_V | 110_I | 1.34 | 0.98 | |
| 14_I | 107_V | 1.29 | 0.97 | |
| 30_W | 63_H | 1.264 | 0.97 | |
| 31_L | 64_I | 1.245 | 0.97 | |
| 80_V | 97_L | 1.236 | 0.97 | |
| 34_G | 102_G | 1.209 | 0.96 | |
| 53_H | 58_Q | 1.191 | 0.95 | |
| 41_E | 66_Y | 1.191 | 0.95 | |
| 67_K | 104_S | 1.175 | 0.95 | |
| 25_R | 59_G | 1.165 | 0.95 | |
| 11_V | 57_A | 1.165 | 0.95 | |
| 28_A | 111_E | 1.15 | 0.94 | |
| 7_C | 43_A | 1.107 | 0.93 | |
| 5_S | 9_S | 1.089 | 0.92 | |
| 12_E | 15_Q | 1.088 | 0.92 | |
| 11_V | 51_V | 1.086 | 0.92 | |
| 79_V | 100_D | 1.082 | 0.91 | |
| 8_Q | 51_V | 1.08 | 0.91 | |
| 14_I | 29_V | 1.079 | 0.91 | |
| 43_A | 47_S | 1.054 | 0.90 | |
| 42_S | 45_R | 1.037 | 0.89 | |
| 13_I | 107_V | 1.027 | 0.88 | |
| 7_C | 10_A | 1.012 | 0.87 | |
| 74_W | 96_R | 1.004 | 0.87 | |
| 10_A | 31_L | 1.001 | 0.86 | |
| 18_A | 26_V | 1.001 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3a43A | 2 | 1 | 100 | 0.042 | Contact Map | 0.805 |
| 2kdxA | 1 | 1 | 100 | 0.062 | Contact Map | 0.724 |
| 2k2dA | 1 | 0.6549 | 99 | 0.668 | Contact Map | 0.695 |
| 3pwfA | 2 | 0.8319 | 95.7 | 0.823 | Contact Map | 0.511 |
| 1lkoA | 1 | 0.885 | 95.5 | 0.826 | Contact Map | 0.5 |
| 2lcqA | 1 | 0.9115 | 95.2 | 0.829 | Contact Map | 0.363 |
| 4aybP | 1 | 0.3805 | 94.8 | 0.833 | Contact Map | 0.042 |
| 1yuzA | 2 | 0.7965 | 94.5 | 0.836 | Contact Map | 0.593 |
| 1s24A | 1 | 0.5575 | 83 | 0.871 | Contact Map | 0.751 |
| 3h0gL | 2 | 0.5398 | 81.7 | 0.873 | Contact Map | 0.535 |
Sequence Conservation (Image Generated using WebLogo v3)