| UniProt: | P07822 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10305 | ||
| Length: | 296 (261) | ||
| Sequences: | 5503 | ||
| Seq/Len: | 21.08 |
| FHUD
Paralog alert: 0.76 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: BTUF FECB FEPB FHUD |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 142_A | 151_A | 5.314 | 1.00 | |
| 231_K | 259_P | 5.083 | 1.00 | |
| 139_T | 152_E | 4.962 | 1.00 | |
| 135_R | 159_E | 3.929 | 1.00 | |
| 147_L | 150_A | 3.805 | 1.00 | |
| 143_D | 148_Q | 3.582 | 1.00 | |
| 259_P | 263_A | 3.354 | 1.00 | |
| 40_A | 46_V | 3.105 | 1.00 | |
| 156_A | 160_D | 2.989 | 1.00 | |
| 139_T | 155_L | 2.975 | 1.00 | |
| 152_E | 156_A | 2.883 | 1.00 | |
| 201_L | 206_I | 2.772 | 1.00 | |
| 37_R | 57_Y | 2.661 | 1.00 | |
| 163_R | 167_P | 2.653 | 1.00 | |
| 39_V | 92_L | 2.519 | 1.00 | |
| 161_F | 282_M | 2.501 | 1.00 | |
| 150_A | 153_T | 2.5 | 1.00 | |
| 91_L | 94_E | 2.471 | 1.00 | |
| 176_P | 207_P | 2.421 | 1.00 | |
| 49_L | 145_L | 2.329 | 1.00 | |
| 38_I | 145_L | 2.204 | 1.00 | |
| 198_Q | 202_D | 2.176 | 1.00 | |
| 153_T | 157_Q | 2.137 | 1.00 | |
| 54_I | 147_L | 2.113 | 1.00 | |
| 226_R | 229_A | 2.081 | 1.00 | |
| 48_L | 138_L | 2.072 | 1.00 | |
| 54_I | 145_L | 2.048 | 1.00 | |
| 159_E | 163_R | 2.037 | 1.00 | |
| 250_M | 264_G | 2.016 | 1.00 | |
| 112_M | 115_R | 1.952 | 1.00 | |
| 58_G | 95_M | 1.928 | 1.00 | |
| 110_P | 114_A | 1.908 | 1.00 | |
| 233_V | 259_P | 1.88 | 1.00 | |
| 101_V | 141_M | 1.845 | 1.00 | |
| 164_S | 168_R | 1.834 | 1.00 | |
| 139_T | 159_E | 1.833 | 1.00 | |
| 160_D | 164_S | 1.823 | 1.00 | |
| 90_E | 225_D | 1.733 | 1.00 | |
| 255_W | 261_V | 1.726 | 1.00 | |
| 163_R | 166_K | 1.707 | 1.00 | |
| 258_M | 261_V | 1.698 | 1.00 | |
| 87_P | 92_L | 1.692 | 1.00 | |
| 133_M | 136_K | 1.679 | 1.00 | |
| 161_F | 286_R | 1.678 | 1.00 | |
| 93_T | 116_I | 1.636 | 1.00 | |
| 35_P | 98_S | 1.626 | 1.00 | |
| 120_R | 144_L | 1.62 | 1.00 | |
| 39_V | 58_G | 1.601 | 1.00 | |
| 234_D | 265_R | 1.6 | 1.00 | |
| 52_L | 147_L | 1.577 | 1.00 | |
| 56_P | 78_V | 1.569 | 1.00 | |
| 39_V | 95_M | 1.568 | 1.00 | |
| 234_D | 267_Q | 1.558 | 1.00 | |
| 40_A | 49_L | 1.532 | 1.00 | |
| 136_K | 139_T | 1.51 | 1.00 | |
| 149_S | 153_T | 1.507 | 1.00 | |
| 111_E | 115_R | 1.492 | 1.00 | |
| 36_N | 98_S | 1.45 | 1.00 | |
| 209_A | 230_Y | 1.442 | 1.00 | |
| 135_R | 155_L | 1.44 | 1.00 | |
| 287_V | 290_N | 1.436 | 1.00 | |
| 259_P | 262_R | 1.43 | 1.00 | |
| 156_A | 159_E | 1.426 | 1.00 | |
| 157_Q | 161_F | 1.42 | 1.00 | |
| 100_M | 117_A | 1.387 | 0.99 | |
| 148_Q | 152_E | 1.372 | 0.99 | |
| 149_S | 152_E | 1.366 | 0.99 | |
| 111_E | 114_A | 1.364 | 0.99 | |
| 102_W | 121_G | 1.359 | 0.99 | |
| 99_F | 120_R | 1.359 | 0.99 | |
| 247_D | 251_A | 1.351 | 0.99 | |
| 246_M | 250_M | 1.349 | 0.99 | |
| 247_D | 250_M | 1.342 | 0.99 | |
| 88_N | 91_L | 1.339 | 0.99 | |
| 226_R | 230_Y | 1.336 | 0.99 | |
| 136_K | 140_E | 1.336 | 0.99 | |
| 120_R | 140_E | 1.303 | 0.99 | |
| 177_L | 206_I | 1.3 | 0.99 | |
| 157_Q | 160_D | 1.297 | 0.99 | |
| 79_I | 91_L | 1.287 | 0.99 | |
| 57_Y | 95_M | 1.28 | 0.99 | |
| 38_I | 99_F | 1.274 | 0.99 | |
| 255_W | 258_M | 1.252 | 0.99 | |
| 150_A | 154_H | 1.248 | 0.99 | |
| 140_E | 144_L | 1.233 | 0.98 | |
| 51_A | 154_H | 1.226 | 0.98 | |
| 257_A | 262_R | 1.211 | 0.98 | |
| 167_P | 170_V | 1.21 | 0.98 | |
| 37_R | 96_K | 1.204 | 0.98 | |
| 155_L | 159_E | 1.199 | 0.98 | |
| 49_L | 101_V | 1.188 | 0.98 | |
| 176_P | 233_V | 1.184 | 0.98 | |
| 50_L | 56_P | 1.178 | 0.98 | |
| 49_L | 56_P | 1.168 | 0.97 | |
| 285_V | 289_D | 1.162 | 0.97 | |
| 100_M | 116_I | 1.15 | 0.97 | |
| 235_V | 260_F | 1.136 | 0.97 | |
| 154_H | 157_Q | 1.13 | 0.97 | |
| 49_L | 54_I | 1.128 | 0.97 | |
| 174_A | 207_P | 1.115 | 0.96 | |
| 162_I | 203_E | 1.112 | 0.96 | |
| 212_G | 230_Y | 1.11 | 0.96 | |
| 164_S | 167_P | 1.09 | 0.96 | |
| 93_T | 117_A | 1.07 | 0.95 | |
| 161_F | 165_M | 1.067 | 0.95 | |
| 45_P | 101_V | 1.058 | 0.95 | |
| 244_K | 247_D | 1.055 | 0.95 | |
| 58_G | 82_G | 1.05 | 0.94 | |
| 224_I | 252_T | 1.05 | 0.94 | |
| 138_L | 151_A | 1.048 | 0.94 | |
| 228_A | 258_M | 1.048 | 0.94 | |
| 160_D | 163_R | 1.046 | 0.94 | |
| 282_M | 286_R | 1.042 | 0.94 | |
| 259_P | 265_R | 1.041 | 0.94 | |
| 169_F | 172_R | 1.034 | 0.94 | |
| 210_W | 230_Y | 1.034 | 0.94 | |
| 60_A | 63_I | 1.026 | 0.94 | |
| 89_L | 112_M | 1.022 | 0.93 | |
| 162_I | 166_K | 1.013 | 0.93 | |
| 114_A | 119_G | 1.006 | 0.93 | |
| 107_G | 111_E | 1.005 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1efdN | 1 | 0.8986 | 100 | 0.332 | Contact Map | 0.684 |
| 3tefA | 1 | 0.9324 | 100 | 0.366 | Contact Map | 0.733 |
| 2r7aA | 4 | 0.8277 | 100 | 0.378 | Contact Map | 0.833 |
| 2r79A | 1 | 0.8446 | 100 | 0.381 | Contact Map | 0.661 |
| 2q8pA | 1 | 0.8311 | 100 | 0.385 | Contact Map | 0.769 |
| 3lhsA | 1 | 0.9392 | 100 | 0.385 | Contact Map | 0.715 |
| 3tnyA | 1 | 0.9662 | 100 | 0.387 | Contact Map | 0.749 |
| 4hn9A | 2 | 0.9696 | 100 | 0.388 | Contact Map | 0.773 |
| 3md9A | 2 | 0.8243 | 100 | 0.392 | Contact Map | 0.746 |
| 3mwfA | 1 | 0.9155 | 100 | 0.393 | Contact Map | 0.758 |
Sequence Conservation (Image Generated using WebLogo v3)