May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

QUEC - QUED
UniProt: P77756 - P65870
Length: 352
Sequences: 294
Seq/Len: 0.87
I_Prob: 0.02

QUEC - 7-cyano-7-deazaguanine synthase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: QUEC
QUED - 6-carboxy-5,6,7,8-tetrahydropterin synthase
Paralog alert: 0.13 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: QUED
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
180_L 108_V 1.55 0.02
68_E 76_D 1.39 0.01
90_G 52_I 1.20 0.01
162_W 57_E 1.19 0.01
54_G 57_E 1.07 0.01
166_A 106_V 1.06 0.01
47_R 99_V 1.02 0.00
103_F 15_A 1.02 0.00
31_V 103_L 1.01 0.00
77_D 74_L 1.00 0.00
119_V 18_L 0.99 0.00
211_N 89_A 0.96 0.00
5_V 87_V 0.94 0.00
23_Q 58_L 0.94 0.00
172_A 14_A 0.93 0.00
54_G 39_L 0.93 0.00
149_G 51_W 0.93 0.00
40_R 98_P 0.93 0.00
169_W 37_V 0.92 0.00
88_A 37_V 0.91 0.00
17_C 117_I 0.90 0.00
44_D 64_P 0.89 0.00
40_R 20_H 0.88 0.00
59_K 34_S 0.88 0.00
119_V 37_V 0.88 0.00
5_V 56_A 0.87 0.00
50_A 89_A 0.87 0.00
178_L 69_L 0.87 0.00
138_F 85_S 0.87 0.00
55_A 97_K 0.86 0.00
108_A 51_W 0.86 0.00
18_L 15_A 0.85 0.00
61_L 6_L 0.85 0.00
69_L 40_E 0.84 0.00
119_V 57_E 0.84 0.00
190_N 76_D 0.83 0.00
62_D 58_L 0.83 0.00
216_D 94_D 0.83 0.00
160_L 116_C 0.83 0.00
75_T 74_L 0.82 0.00
63_V 38_R 0.82 0.00
40_R 41_I 0.82 0.00
182_R 108_V 0.81 0.00
87_E 41_I 0.81 0.00
211_N 98_P 0.81 0.00
31_V 4_T 0.81 0.00
41_A 79_G 0.81 0.00
51_L 97_K 0.80 0.00
140_K 48_H 0.80 0.00
52_K 35_F 0.80 0.00
120_I 37_V 0.79 0.00
80_P 99_V 0.79 0.00
112_Y 29_R 0.79 0.00
61_L 92_I 0.79 0.00
152_K 58_L 0.79 0.00
149_G 58_L 0.78 0.00
38_R 75_N 0.78 0.00
32_T 4_T 0.78 0.00
25_Y 73_Y 0.78 0.00
48_E 37_V 0.77 0.00
59_K 92_I 0.77 0.00
60_V 98_P 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2028 seconds.