| UniProt: | P65870 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13120 | ||
| Length: | 121 (120) | ||
| Sequences: | 1453 | ||
| Seq/Len: | 12.11 |
| QUED
Paralog alert: 0.13 [within 20: 0.03] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 13_E | 34_S | 3.892 | 1.00 | |
| 107_M | 117_I | 2.78 | 1.00 | |
| 68_R | 95_Q | 2.519 | 1.00 | |
| 90_K | 94_D | 2.474 | 1.00 | |
| 105_A | 117_I | 2.394 | 1.00 | |
| 105_A | 119_R | 2.313 | 1.00 | |
| 43_G | 52_I | 2.234 | 1.00 | |
| 41_I | 58_L | 2.222 | 1.00 | |
| 9_D | 36_M | 2.22 | 1.00 | |
| 9_D | 38_R | 2.161 | 1.00 | |
| 17_R | 73_Y | 2.139 | 1.00 | |
| 7_F | 40_E | 2.066 | 1.00 | |
| 69_L | 91_W | 2.057 | 1.00 | |
| 5_T | 42_T | 1.889 | 1.00 | |
| 12_F | 37_V | 1.841 | 1.00 | |
| 7_F | 115_G | 1.802 | 1.00 | |
| 75_N | 83_P | 1.793 | 1.00 | |
| 30_L | 73_Y | 1.785 | 1.00 | |
| 38_R | 107_M | 1.782 | 1.00 | |
| 93_W | 120_G | 1.768 | 1.00 | |
| 37_V | 108_V | 1.744 | 1.00 | |
| 39_L | 62_F | 1.744 | 1.00 | |
| 42_T | 104_S | 1.667 | 1.00 | |
| 63_K | 67_E | 1.66 | 1.00 | |
| 5_T | 40_E | 1.613 | 1.00 | |
| 64_P | 99_V | 1.612 | 1.00 | |
| 97_K | 120_G | 1.548 | 1.00 | |
| 69_L | 92_I | 1.541 | 1.00 | |
| 38_R | 109_K | 1.492 | 1.00 | |
| 41_I | 53_I | 1.415 | 1.00 | |
| 90_K | 118_Y | 1.361 | 0.99 | |
| 40_E | 105_A | 1.353 | 0.99 | |
| 39_L | 96_V | 1.295 | 0.99 | |
| 69_L | 95_Q | 1.275 | 0.99 | |
| 15_A | 73_Y | 1.269 | 0.99 | |
| 8_K | 113_T | 1.269 | 0.99 | |
| 89_A | 106_V | 1.248 | 0.99 | |
| 34_S | 112_C | 1.232 | 0.98 | |
| 27_C | 71_H | 1.227 | 0.98 | |
| 60_A | 64_P | 1.215 | 0.98 | |
| 7_F | 38_R | 1.199 | 0.98 | |
| 29_R | 72_H | 1.19 | 0.98 | |
| 95_Q | 98_P | 1.173 | 0.98 | |
| 7_F | 107_M | 1.156 | 0.97 | |
| 91_W | 95_Q | 1.122 | 0.97 | |
| 93_W | 118_Y | 1.115 | 0.96 | |
| 50_G | 87_V | 1.11 | 0.96 | |
| 37_V | 62_F | 1.095 | 0.96 | |
| 10_F | 59_K | 1.066 | 0.95 | |
| 54_D | 57_E | 1.05 | 0.94 | |
| 19_P | 28_G | 1.049 | 0.94 | |
| 28_G | 84_T | 1.032 | 0.94 | |
| 107_M | 115_G | 1.017 | 0.93 | |
| 89_A | 116_C | 1.016 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2obaA | 6 | 1 | 100 | 0.074 | Contact Map | 0.868 |
| 3d7jA | 6 | 0.9917 | 100 | 0.098 | Contact Map | 0.824 |
| 2g64A | 1 | 1 | 100 | 0.132 | Contact Map | 0.795 |
| 1b66A | 2 | 1 | 100 | 0.133 | Contact Map | 0.774 |
| 3jygA | 6 | 0.9669 | 100 | 0.15 | Contact Map | 0.788 |
| 2dj6A | 3 | 0.9256 | 100 | 0.174 | Contact Map | 0.803 |
| 1y13A | 3 | 0.9669 | 100 | 0.183 | Contact Map | 0.677 |
| 3lx3A | 1 | 0.9669 | 100 | 0.195 | Contact Map | 0.709 |
| 3o1kA | 4 | 0.8512 | 39.7 | 0.917 | Contact Map | 0.766 |
| 1dhnA | 1 | 0.8595 | 29.2 | 0.923 | Contact Map | 0.659 |
Sequence Conservation (Image Generated using WebLogo v3)