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OPENSEQ.org
YKGE - YKGF
UniProt: P77252 - P77536
Length: 714
Sequences: 463
Seq/Len: 0.65
I_Prob: 0.69
YKGE - Uncharacterized protein YkgE
Paralog alert: 0.65 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: GLCF GLPC YKGE 		YKGF - Uncharacterized electron transport protein YkgF
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YKGF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
145_G 370_N 2.14 0.69
13_A 420_M 1.98 0.57
222_R 451_D 1.89 0.50
184_E 15_R 1.77 0.41
27_E 467_H 1.52 0.23
122_V 79_Q 1.47 0.20
221_Q 451_D 1.47 0.19
22_S 117_T 1.39 0.15
20_R 463_W 1.36 0.14
192_E 327_H 1.36 0.14
187_G 449_A 1.25 0.10
93_D 196_F 1.16 0.07
197_L 328_I 1.15 0.07
64_A 422_A 1.15 0.07
24_L 412_H 1.13 0.06
37_E 465_K 1.12 0.06
18_M 67_D 1.12 0.06
99_S 210_V 1.12 0.06
185_I 106_A 1.11 0.06
194_V 375_R 1.11 0.06
16_S 37_N 1.10 0.06
193_K 135_E 1.10 0.05
10_I 245_A 1.07 0.05
45_P 268_T 1.07 0.05
185_I 65_N 1.06 0.05
31_C 202_G 1.04 0.04
205_L 147_Q 1.02 0.04
73_I 346_S 1.01 0.04
18_M 200_E 1.00 0.04
51_Y 227_M 1.00 0.04
34_N 67_D 1.00 0.04
35_F 24_R 1.00 0.04
12_D 358_L 0.99 0.04
150_P 206_C 0.99 0.04
85_K 102_Q 0.98 0.03
190_V 377_P 0.98 0.03
215_N 377_P 0.98 0.03
12_D 416_W 0.97 0.03
75_S 41_M 0.96 0.03
218_G 70_L 0.95 0.03
218_G 446_W 0.94 0.03
60_K 105_N 0.94 0.03
152_T 465_K 0.94 0.03
107_R 278_R 0.94 0.03
1_M 62_V 0.94 0.03
51_Y 390_A 0.93 0.03
184_E 434_G 0.93 0.03
58_G 411_S 0.93 0.03
131_R 209_A 0.93 0.03
16_S 456_D 0.92 0.03
128_L 272_T 0.92 0.03
35_F 461_R 0.92 0.03
163_L 171_E 0.91 0.03
106_A 122_V 0.91 0.02
52_I 387_R 0.91 0.02
154_L 238_V 0.90 0.02
112_T 319_M 0.90 0.02
14_L 363_S 0.89 0.02
110_D 97_I 0.89 0.02
46_A 139_G 0.89 0.02
145_G 287_E 0.89 0.02
23_V 464_F 0.89 0.02
88_P 308_D 0.89 0.02
99_S 203_I 0.88 0.02
163_L 353_K 0.88 0.02
27_E 468_Q 0.88 0.02
21_D 244_I 0.87 0.02
216_I 385_H 0.87 0.02
207_G 227_M 0.86 0.02
228_K 88_R 0.86 0.02
36_P 109_V 0.86 0.02
44_Q 70_L 0.86 0.02
40_G 403_I 0.86 0.02
187_G 459_S 0.86 0.02
63_I 422_A 0.86 0.02
68_D 20_D 0.86 0.02
57_P 108_K 0.85 0.02
19_A 423_G 0.85 0.02
222_R 270_Y 0.85 0.02
62_L 201_I 0.85 0.02
44_Q 340_P 0.85 0.02
60_K 391_E 0.85 0.02
197_L 387_R 0.85 0.02
216_I 399_E 0.85 0.02
156_N 80_N 0.84 0.02
206_I 62_V 0.84 0.02
238_S 363_S 0.84 0.02
10_I 346_S 0.84 0.02
67_E 94_T 0.84 0.02
229_V 67_D 0.83 0.02
231_H 258_L 0.83 0.02
103_K 50_E 0.83 0.02
70_D 423_G 0.83 0.02
135_H 235_H 0.83 0.02
27_E 447_M 0.83 0.02
31_C 237_A 0.82 0.02
92_A 300_E 0.82 0.02
205_L 349_L 0.82 0.02
16_S 14_I 0.82 0.02
73_I 124_H 0.82 0.02
187_G 167_R 0.82 0.02
185_I 328_I 0.82 0.02
143_K 235_H 0.81 0.02
32_R 110_V 0.81 0.01
105_A 292_V 0.81 0.01
189_M 363_S 0.81 0.01
115_I 248_F 0.81 0.01
139_S 188_I 0.80 0.01
105_A 245_A 0.80 0.01
88_P 203_I 0.80 0.01
10_I 171_E 0.80 0.01
14_L 162_R 0.80 0.01
83_A 455_A 0.80 0.01
14_L 455_A 0.80 0.01
197_L 194_E 0.80 0.01
174_F 446_W 0.80 0.01
232_I 220_T 0.80 0.01
18_M 244_I 0.80 0.01
10_I 19_E 0.80 0.01
75_S 153_V 0.79 0.01
95_P 196_F 0.79 0.01
132_A 212_E 0.79 0.01
206_I 164_Q 0.79 0.01
29_L 248_F 0.79 0.01
44_Q 446_W 0.79 0.01
107_R 9_D 0.79 0.01
12_D 362_C 0.79 0.01
25_L 63_L 0.78 0.01
115_I 419_G 0.78 0.01
77_A 70_L 0.78 0.01
180_V 72_Q 0.78 0.01
121_V 122_V 0.78 0.01
144_L 455_A 0.78 0.01
11_G 305_E 0.78 0.01
51_Y 248_F 0.78 0.01
139_S 365_C 0.77 0.01
27_E 458_E 0.77 0.01
48_N 446_W 0.77 0.01
44_Q 333_Y 0.77 0.01
67_E 248_F 0.77 0.01
224_G 128_D 0.77 0.01
205_L 199_A 0.76 0.01
235_V 94_T 0.76 0.01
146_V 397_K 0.76 0.01
174_F 340_P 0.76 0.01
185_I 13_R 0.76 0.01
126_A 79_Q 0.76 0.01
145_G 200_E 0.76 0.01
197_L 351_G 0.76 0.01
222_R 463_W 0.76 0.01
56_I 76_K 0.76 0.01
121_V 167_R 0.76 0.01
204_Y 248_F 0.75 0.01
70_D 407_A 0.75 0.01
227_V 465_K 0.75 0.01
146_V 148_D 0.75 0.01
120_G 426_A 0.75 0.01
204_Y 210_V 0.75 0.01
25_L 459_S 0.75 0.01
207_G 20_D 0.75 0.01
87_Y 202_G 0.75 0.01
85_K 198_S 0.75 0.01
129_Q 363_S 0.75 0.01
73_I 129_A 0.74 0.01
23_V 96_Y 0.74 0.01
34_N 65_N 0.74 0.01
169_D 165_I 0.74 0.01
206_I 165_I 0.74 0.01
146_V 462_S 0.74 0.01
25_L 321_T 0.74 0.01
32_R 147_Q 0.74 0.01
68_D 457_G 0.74 0.01
35_F 367_A 0.74 0.01
207_G 348_L 0.74 0.01
184_E 424_A 0.74 0.01
122_V 102_Q 0.74 0.01
55_A 57_Q 0.74 0.01
188_E 31_Q 0.74 0.01
107_R 447_M 0.74 0.01
182_M 139_G 0.74 0.01
64_A 99_Q 0.73 0.01
174_F 70_L 0.73 0.01
52_I 110_V 0.73 0.01
237_M 27_V 0.73 0.01
196_H 417_K 0.73 0.01
107_R 445_D 0.73 0.01
209_D 446_W 0.73 0.01
205_L 110_V 0.73 0.01
164_T 122_V 0.73 0.01
145_G 292_V 0.73 0.01
81_T 100_V 0.73 0.01
130_G 89_T 0.73 0.01
7_V 381_L 0.72 0.01
131_R 163_H 0.72 0.01
35_F 463_W 0.72 0.01
222_R 359_P 0.72 0.01
74_I 188_I 0.72 0.01
220_L 54_R 0.72 0.01
137_S 306_F 0.72 0.01
32_R 158_I 0.72 0.01
32_R 448_E 0.72 0.01
92_A 102_Q 0.72 0.01
145_G 91_E 0.72 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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