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RNFD - RNFG
UniProt: P76182 - P77285
Length: 558
Sequences: 731
Seq/Len: 1.34
I_Prob: 0.34

RNFD - Electron transport complex protein RnfD
Paralog alert: 0.32 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNFD
RNFG - Electron transport complex protein RnfG
Paralog alert: 0.35 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
104_F 176_T 1.64 0.34
229_A 116_V 1.37 0.18
109_A 171_T 1.37 0.18
184_S 171_T 1.29 0.14
190_D 16_A 1.24 0.12
251_T 179_A 1.22 0.11
25_L 83_Q 1.06 0.06
278_A 26_I 1.05 0.06
284_F 117_L 1.04 0.06
127_G 123_E 1.04 0.06
81_T 162_K 1.04 0.06
142_W 171_T 1.04 0.06
201_S 18_G 1.04 0.06
227_W 14_L 1.00 0.05
44_L 104_I 0.99 0.05
132_L 133_K 0.98 0.05
112_L 87_P 0.98 0.05
188_P 171_T 0.98 0.05
300_R 24_A 0.97 0.05
225_L 14_L 0.96 0.04
292_T 18_G 0.94 0.04
347_Y 16_A 0.94 0.04
60_L 84_D 0.94 0.04
291_V 130_L 0.94 0.04
121_F 171_T 0.94 0.04
304_G 187_A 0.93 0.04
232_V 29_M 0.92 0.04
293_A 133_K 0.92 0.04
116_L 162_K 0.92 0.04
127_G 107_L 0.92 0.04
298_R 160_V 0.92 0.04
231_G 172_G 0.91 0.04
142_W 107_L 0.91 0.04
303_F 72_G 0.91 0.04
103_V 116_V 0.91 0.04
231_G 120_R 0.90 0.04
330_L 122_T 0.89 0.03
137_V 148_K 0.89 0.03
338_I 12_L 0.89 0.03
134_S 102_G 0.89 0.03
121_F 134_I 0.88 0.03
184_S 39_S 0.88 0.03
229_A 135_E 0.88 0.03
182_G 65_L 0.88 0.03
262_F 36_E 0.88 0.03
304_G 168_D 0.87 0.03
283_A 150_I 0.87 0.03
313_L 26_I 0.87 0.03
113_Y 19_S 0.87 0.03
85_L 49_V 0.87 0.03
45_V 17_A 0.86 0.03
219_G 178_R 0.86 0.03
29_V 55_Y 0.85 0.03
121_F 165_G 0.85 0.03
194_T 110_A 0.85 0.03
319_G 100_Y 0.85 0.03
149_A 197_Q 0.85 0.03
300_R 8_H 0.84 0.03
27_A 35_A 0.84 0.03
86_A 125_H 0.84 0.03
111_Q 161_K 0.84 0.03
311_V 16_A 0.84 0.03
109_A 8_H 0.84 0.03
229_A 84_D 0.84 0.03
236_W 108_V 0.84 0.03
20_I 10_I 0.84 0.03
254_L 94_A 0.84 0.03
257_M 58_A 0.84 0.03
339_D 172_G 0.84 0.03
31_G 102_G 0.83 0.03
116_L 175_I 0.83 0.03
301_L 44_A 0.83 0.03
136_P 128_P 0.83 0.03
244_I 183_A 0.83 0.03
46_Q 45_L 0.83 0.03
276_S 184_V 0.83 0.03
300_R 20_T 0.83 0.03
9_P 165_G 0.82 0.03
296_T 121_V 0.82 0.03
235_L 35_A 0.82 0.03
226_A 192_Q 0.82 0.03
284_F 48_Q 0.82 0.03
58_E 30_T 0.82 0.03
318_G 179_A 0.82 0.03
158_A 198_L 0.82 0.03
282_G 109_G 0.82 0.03
293_A 23_T 0.82 0.02
188_P 26_I 0.82 0.02
133_I 17_A 0.82 0.02
28_A 145_F 0.81 0.02
302_I 68_A 0.81 0.02
147_E 200_Q 0.81 0.02
274_L 10_I 0.81 0.02
227_W 153_A 0.81 0.02
199_G 155_D 0.81 0.02
302_I 83_Q 0.81 0.02
335_V 47_D 0.81 0.02
50_A 97_P 0.81 0.02
296_T 49_V 0.81 0.02
240_I 30_T 0.80 0.02
109_A 24_A 0.80 0.02
239_A 176_T 0.80 0.02
247_S 150_I 0.80 0.02
292_T 48_Q 0.80 0.02
295_T 55_Y 0.80 0.02
294_S 65_L 0.80 0.02
243_H 178_R 0.80 0.02
9_P 163_D 0.79 0.02
344_P 160_V 0.79 0.02
313_L 140_D 0.79 0.02
312_W 169_Q 0.79 0.02
61_V 128_P 0.79 0.02
289_D 162_K 0.79 0.02
127_G 26_I 0.79 0.02
29_V 21_G 0.79 0.02
329_L 128_P 0.79 0.02
129_V 37_Q 0.79 0.02
240_I 175_I 0.79 0.02
56_L 5_I 0.79 0.02
320_Y 166_D 0.78 0.02
257_M 85_D 0.78 0.02
303_F 152_G 0.78 0.02
225_L 22_L 0.78 0.02
281_L 121_V 0.78 0.02
239_A 80_I 0.78 0.02
125_M 170_F 0.78 0.02
318_G 96_A 0.78 0.02
134_S 165_G 0.78 0.02
179_G 136_L 0.78 0.02
290_P 134_I 0.78 0.02
108_I 135_E 0.78 0.02
87_V 171_T 0.78 0.02
125_M 141_W 0.77 0.02
152_I 68_A 0.77 0.02
346_V 8_H 0.77 0.02
2_V 191_A 0.77 0.02
323_G 139_S 0.77 0.02
103_V 28_Q 0.77 0.02
254_L 111_D 0.77 0.02
340_Y 24_A 0.77 0.02
233_W 185_K 0.76 0.02
250_V 72_G 0.76 0.02
245_P 49_V 0.76 0.02
199_G 48_Q 0.76 0.02
112_L 178_R 0.76 0.02
303_F 171_T 0.76 0.02
232_V 14_L 0.76 0.02
229_A 48_Q 0.76 0.02
254_L 90_A 0.76 0.02
36_L 10_I 0.76 0.02
169_S 200_Q 0.75 0.02
76_N 98_D 0.75 0.02
331_A 37_Q 0.75 0.02
80_L 49_V 0.75 0.02
234_L 181_V 0.75 0.02
130_V 17_A 0.75 0.02
11_T 148_K 0.75 0.02
93_A 120_R 0.75 0.02
28_A 182_N 0.75 0.02
303_F 160_V 0.75 0.02
131_L 175_I 0.74 0.02
194_T 169_Q 0.74 0.02
121_F 117_L 0.74 0.02
335_V 101_S 0.74 0.02
121_F 132_D 0.74 0.02
89_I 185_K 0.74 0.02
80_L 133_K 0.74 0.02
330_L 172_G 0.74 0.02
191_T 187_A 0.74 0.02
337_L 94_A 0.74 0.02
43_T 148_K 0.74 0.02
258_L 66_V 0.74 0.02
343_R 188_G 0.74 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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