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OPENSEQ.org

CCME - DSBE
UniProt: P69490 - P0AA86
Length: 344
Sequences: 281
Seq/Len: 0.86
I_Prob: 0.00

CCME - Cytochrome c-type biogenesis protein CcmE
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCME
DSBE - Thiol:disulfide interchange protein DsbE
Paralog alert: 0.18 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_I 60_Y 1.44 0.00
71_V 175_L 1.36 0.00
30_L 175_L 1.34 0.00
30_L 143_A 1.33 0.00
137_P 76_W 1.32 0.00
138_E 135_G 1.30 0.00
36_L 136_L 1.24 0.00
35_D 143_A 1.23 0.00
5_R 76_W 1.21 0.00
37_F 9_P 1.19 0.00
128_A 122_P 1.19 0.00
84_I 94_S 1.18 0.00
30_L 162_D 1.18 0.00
65_M 157_Y 1.17 0.00
18_G 87_H 1.15 0.00
36_L 78_T 1.14 0.00
34_I 167_V 1.14 0.00
126_V 174_P 1.13 0.00
35_D 78_T 1.13 0.00
67_M 85_A 1.12 0.00
60_L 133_M 1.11 0.00
21_L 173_K 1.10 0.00
121_I 176_W 1.09 0.00
126_V 33_P 1.09 0.00
55_E 135_G 1.09 0.00
79_K 155_I 1.07 0.00
43_I 39_A 1.07 0.00
104_R 65_L 1.06 0.00
30_L 39_A 1.06 0.00
18_G 104_N 1.04 0.00
27_L 24_L 1.04 0.00
39_T 14_L 1.04 0.00
62_V 78_T 1.03 0.00
93_V 174_P 1.03 0.00
142_A 105_Y 1.03 0.00
142_A 132_G 1.02 0.00
65_M 159_H 1.02 0.00
141_K 109_R 1.02 0.00
28_Y 73_L 1.02 0.00
37_F 147_F 1.01 0.00
27_L 179_Y 1.01 0.00
5_R 59_F 1.00 0.00
107_Q 138_L 1.00 0.00
129_K 43_K 0.99 0.00
7_N 35_N 0.98 0.00
13_C 172_I 0.98 0.00
129_K 142_G 0.97 0.00
12_A 98_I 0.96 0.00
129_K 44_P 0.95 0.00
17_A 5_V 0.95 0.00
15_V 136_L 0.95 0.00
14_A 57_G 0.94 0.00
60_L 103_M 0.94 0.00
139_V 3_R 0.94 0.00
136_P 122_P 0.94 0.00
87_A 70_P 0.93 0.00
16_L 14_L 0.93 0.00
73_R 20_L 0.93 0.00
128_A 121_N 0.93 0.00
80_V 138_L 0.93 0.00
80_V 157_Y 0.92 0.00
141_K 181_K 0.92 0.00
40_P 172_I 0.91 0.00
7_N 149_I 0.91 0.00
26_V 158_R 0.91 0.00
118_G 12_I 0.90 0.00
65_M 94_S 0.90 0.00
121_I 149_I 0.89 0.00
21_L 163_L 0.89 0.00
17_A 20_L 0.89 0.00
142_A 135_G 0.89 0.00
28_Y 158_R 0.88 0.00
107_Q 143_A 0.88 0.00
6_K 84_R 0.88 0.00
92_D 166_R 0.87 0.00
62_V 58_Q 0.86 0.00
121_I 103_M 0.86 0.00
18_G 36_L 0.86 0.00
31_R 67_Q 0.86 0.00
9_L 168_W 0.86 0.00
110_V 148_L 0.85 0.00
22_T 157_Y 0.85 0.00
70_S 156_R 0.85 0.00
18_G 138_L 0.85 0.00
91_V 77_A 0.85 0.00
38_Y 168_W 0.85 0.00
126_V 140_V 0.85 0.00
38_Y 100_V 0.84 0.00
96_E 11_I 0.84 0.00
54_P 127_L 0.84 0.00
13_C 177_E 0.84 0.00
72_Q 58_Q 0.84 0.00
17_A 69_K 0.83 0.00
121_I 78_T 0.83 0.00
109_V 67_Q 0.83 0.00
94_S 55_N 0.82 0.00
62_V 168_W 0.82 0.00
19_L 172_I 0.82 0.00
133_N 20_L 0.82 0.00
33_N 105_Y 0.82 0.00
39_T 147_F 0.82 0.00
108_G 76_W 0.82 0.00
50_T 2_K 0.82 0.00
88_E 16_I 0.82 0.00
3_I 181_K 0.82 0.00
126_V 9_P 0.82 0.00
98_I 70_P 0.82 0.00
57_G 67_Q 0.81 0.00
41_G 180_S 0.81 0.00
60_L 45_V 0.81 0.00
135_T 176_W 0.81 0.00
125_E 13_F 0.81 0.00
87_A 157_Y 0.81 0.00
123_A 122_P 0.81 0.00
12_A 42_G 0.80 0.00
44_L 84_R 0.80 0.00
41_G 19_A 0.80 0.00
112_Q 58_Q 0.80 0.00
30_L 164_N 0.80 0.00
74_D 81_P 0.80 0.00
20_A 175_L 0.79 0.00
109_V 177_E 0.79 0.00
146_N 103_M 0.79 0.00
129_K 123_Y 0.79 0.00
8_R 10_L 0.79 0.00
18_G 62_A 0.79 0.00
45_Y 12_I 0.78 0.00
67_M 101_V 0.78 0.00
68_P 53_L 0.78 0.00
137_P 33_P 0.78 0.00
54_P 82_T 0.78 0.00
131_D 122_P 0.78 0.00
8_R 172_I 0.78 0.00
121_I 25_A 0.78 0.00
126_V 105_Y 0.78 0.00
28_Y 138_L 0.78 0.00
111_V 177_E 0.78 0.00
47_K 12_I 0.78 0.00
124_K 84_R 0.78 0.00
18_G 107_D 0.77 0.00
52_Q 25_A 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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