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OPENSEQ.org
DHSC - DHSD
UniProt: P69054 - P0AC44
Length: 244
Sequences: 219
Seq/Len: 0.90
I_Prob: 0.87
DHSC - Succinate dehydrogenase cytochrome b556 subunit
Paralog alert: 0.05 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: DHSC 		DHSD - Succinate dehydrogenase hydrophobic membrane anchor subunit
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DHSD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2wdqCKG:DHL:DHL:CKGContact Map
2h88CP:DQ:CPContact Map
1kf6DP:DP:COContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_V 79_V 2.17 0.87
24_A 78_Q 1.79 0.66
45_L 111_V 1.68 0.57
87_V 19_V 1.67 0.57
51_S 48_W 1.53 0.44
20_F 78_Q 1.52 0.43
25_I 84_V 1.34 0.28
71_K 61_T 1.31 0.25
92_M 72_A 1.28 0.23
56_E 63_L 1.25 0.21
79_T 77_W 1.24 0.20
49_G 107_Y 1.24 0.20
83_Y 77_W 1.23 0.20
46_W 111_V 1.23 0.19
127_L 22_T 1.23 0.19
63_A 99_V 1.22 0.19
46_W 89_L 1.21 0.18
85_V 27_T 1.20 0.18
85_V 26_L 1.17 0.15
41_V 69_L 1.15 0.15
123_L 67_S 1.15 0.15
76_G 21_A 1.15 0.15
101_E 77_W 1.13 0.14
72_F 14_H 1.13 0.14
45_L 16_F 1.13 0.14
64_I 111_V 1.10 0.12
68_F 41_G 1.10 0.12
125_G 1_M 1.10 0.12
96_F 74_I 1.09 0.12
114_F 41_G 1.08 0.11
17_T 21_A 1.07 0.11
71_K 52_F 1.06 0.11
93_M 16_F 1.06 0.10
63_A 40_S 1.06 0.10
83_Y 81_T 1.05 0.10
47_L 21_A 1.05 0.10
55_P 63_L 1.05 0.10
26_A 7_A 1.03 0.09
73_I 67_S 1.01 0.09
48_L 53_A 1.01 0.08
106_G 69_L 1.00 0.08
32_V 39_T 1.00 0.08
85_V 30_I 1.00 0.08
116_I 59_V 1.00 0.08
42_G 91_L 0.99 0.08
91_H 77_W 0.99 0.08
61_A 6_S 0.99 0.08
49_G 105_V 0.98 0.08
106_G 65_L 0.98 0.07
67_S 31_I 0.98 0.07
92_M 26_L 0.97 0.07
69_F 70_I 0.97 0.07
12_N 94_Q 0.97 0.07
11_V 114_G 0.96 0.07
49_G 16_F 0.96 0.07
78_L 60_F 0.96 0.07
4_N 67_S 0.96 0.07
79_T 81_T 0.95 0.07
121_S 22_T 0.95 0.07
100_E 14_H 0.95 0.07
108_R 53_A 0.95 0.07
111_K 53_A 0.95 0.07
104_E 112_V 0.94 0.06
48_L 45_Y 0.94 0.06
79_T 78_Q 0.94 0.06
81_L 30_I 0.94 0.06
96_F 87_L 0.94 0.06
37_T 28_L 0.93 0.06
8_Q 88_A 0.93 0.06
53_S 28_L 0.93 0.06
112_I 50_G 0.93 0.06
68_F 58_K 0.93 0.06
37_T 58_K 0.93 0.06
69_F 63_L 0.92 0.06
108_R 87_L 0.92 0.06
119_V 17_I 0.92 0.06
113_S 72_A 0.91 0.06
101_E 5_A 0.91 0.06
20_F 97_I 0.91 0.05
105_A 13_V 0.90 0.05
77_I 9_G 0.90 0.05
90_R 26_L 0.90 0.05
123_L 92_M 0.90 0.05
40_A 106_I 0.90 0.05
48_L 73_W 0.90 0.05
38_F 97_I 0.90 0.05
112_I 105_V 0.89 0.05
72_F 74_I 0.89 0.05
19_R 103_V 0.89 0.05
63_A 39_T 0.89 0.05
129_W 104_Y 0.89 0.05
107_K 19_V 0.88 0.05
73_I 60_F 0.88 0.05
97_G 81_T 0.88 0.05
61_A 102_V 0.88 0.05
125_G 52_F 0.87 0.05
122_L 39_T 0.87 0.05
32_V 86_P 0.87 0.05
53_S 17_I 0.87 0.05
33_S 33_M 0.87 0.04
22_I 32_Y 0.86 0.04
117_T 11_N 0.86 0.04
50_T 111_V 0.86 0.04
90_R 69_L 0.86 0.04
24_A 79_V 0.86 0.04
73_I 58_K 0.86 0.04
125_G 43_L 0.86 0.04
104_E 92_M 0.86 0.04
60_Q 45_Y 0.86 0.04
75_W 77_W 0.86 0.04
59_E 63_L 0.86 0.04
13_L 114_G 0.86 0.04
76_G 111_V 0.85 0.04
36_I 40_S 0.85 0.04
8_Q 21_A 0.85 0.04
55_P 56_F 0.84 0.04
37_T 57_T 0.84 0.04
33_S 93_L 0.84 0.04
114_F 93_L 0.84 0.04
58_F 79_V 0.84 0.04
4_N 39_T 0.84 0.04
112_I 60_F 0.84 0.04
42_G 14_H 0.84 0.04
16_Q 72_A 0.84 0.04
22_I 27_T 0.83 0.04
101_E 81_T 0.83 0.04
93_M 24_I 0.83 0.04
110_A 58_K 0.83 0.04
50_T 76_M 0.83 0.04
107_K 23_A 0.83 0.04
94_M 108_G 0.83 0.04
15_L 45_Y 0.83 0.04
75_W 81_T 0.83 0.04
19_R 30_I 0.82 0.04
73_I 53_A 0.82 0.04
109_S 69_L 0.82 0.04
25_I 103_V 0.82 0.04
36_I 108_G 0.82 0.04
69_F 88_A 0.82 0.04
14_D 114_G 0.82 0.04
12_N 77_W 0.82 0.04
58_F 109_F 0.82 0.04
125_G 2_V 0.82 0.04
55_P 34_V 0.82 0.04
53_S 74_I 0.82 0.04
85_V 32_Y 0.81 0.04
90_R 49_I 0.81 0.04
128_V 101_L 0.81 0.04
110_A 48_W 0.81 0.03
67_S 25_V 0.81 0.03
115_V 46_E 0.81 0.03
115_V 96_V 0.81 0.03
115_V 38_A 0.81 0.03
127_L 51_F 0.81 0.03
113_S 87_L 0.81 0.03
39_V 103_V 0.81 0.03
67_S 96_V 0.80 0.03
96_F 28_L 0.80 0.03
61_A 106_I 0.80 0.03
116_I 46_E 0.80 0.03
129_W 15_D 0.80 0.03
32_V 102_V 0.79 0.03
54_S 104_Y 0.79 0.03
70_V 95_L 0.79 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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