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OPENSEQ.org

LIPA - LIPB
UniProt: P60716 - P60720
Length: 534
Sequences: 451
Seq/Len: 0.88
I_Prob: 0.00

LIPA - Lipoyl synthase
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LIPA
LIPB - Octanoyltransferase
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LIPB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_R 97_G 1.25 0.00
291_A 38_I 1.22 0.00
164_K 145_R 1.22 0.00
37_K 98_V 1.17 0.00
126_M 142_R 1.11 0.00
260_L 191_I 1.10 0.00
249_M 15_P 1.10 0.00
181_D 131_V 1.07 0.00
44_K 30_R 1.05 0.00
291_A 91_L 1.04 0.00
36_R 195_L 1.00 0.00
287_M 38_I 1.00 0.00
198_V 42_E 0.99 0.00
160_S 160_L 0.98 0.00
156_I 190_N 0.96 0.00
291_A 15_P 0.96 0.00
219_E 105_L 0.95 0.00
129_R 85_M 0.94 0.00
126_M 179_I 0.94 0.00
276_Q 182_W 0.92 0.00
209_A 41_V 0.91 0.00
228_I 67_I 0.91 0.00
59_M 137_C 0.91 0.00
212_N 145_R 0.91 0.00
197_N 183_K 0.90 0.00
53_Q 196_L 0.89 0.00
294_M 185_E 0.89 0.00
223_E 17_E 0.89 0.00
170_P 43_H 0.88 0.00
123_I 66_V 0.88 0.00
236_V 129_V 0.87 0.00
243_E 33_S 0.87 0.00
234_L 101_L 0.86 0.00
229_P 116_L 0.86 0.00
66_S 122_P 0.86 0.00
155_A 105_L 0.85 0.00
299_A 109_V 0.85 0.00
304_F 69_S 0.85 0.00
13_Y 137_C 0.84 0.00
256_G 105_L 0.84 0.00
223_E 25_E 0.83 0.00
45_L 164_L 0.83 0.00
153_I 44_Y 0.83 0.00
197_N 83_Q 0.82 0.00
14_R 69_S 0.82 0.00
7_M 87_V 0.82 0.00
95_T 34_T 0.82 0.00
155_A 9_R 0.82 0.00
169_V 64_I 0.82 0.00
314_Q 30_R 0.82 0.00
162_Q 15_P 0.82 0.00
61_K 38_I 0.81 0.00
157_R 90_N 0.81 0.00
42_K 13_L 0.81 0.00
293_A 58_I 0.81 0.00
190_V 102_V 0.81 0.00
180_L 30_R 0.80 0.00
69_E 162_P 0.80 0.00
258_T 69_S 0.80 0.00
294_M 13_L 0.80 0.00
191_F 14_Q 0.80 0.00
249_M 18_P 0.79 0.00
293_A 116_L 0.79 0.00
232_S 70_D 0.79 0.00
137_D 74_Q 0.79 0.00
217_L 141_L 0.79 0.00
97_R 70_D 0.79 0.00
131_V 67_I 0.79 0.00
174_G 153_A 0.79 0.00
42_K 172_A 0.78 0.00
249_M 46_V 0.78 0.00
198_V 105_L 0.78 0.00
312_D 57_H 0.78 0.00
19_M 87_V 0.78 0.00
144_G 74_Q 0.78 0.00
250_R 45_P 0.78 0.00
112_D 177_A 0.77 0.00
312_D 126_A 0.77 0.00
26_N 134_K 0.77 0.00
66_S 6_I 0.77 0.00
104_A 113_L 0.77 0.00
169_V 137_C 0.77 0.00
269_S 38_I 0.77 0.00
107_R 67_I 0.77 0.00
236_V 44_Y 0.77 0.00
36_R 185_E 0.77 0.00
124_A 8_V 0.77 0.00
197_N 85_M 0.77 0.00
149_F 203_L 0.77 0.00
69_E 113_L 0.77 0.00
249_M 137_C 0.77 0.00
233_G 53_G 0.76 0.00
39_E 105_L 0.76 0.00
44_K 95_K 0.76 0.00
277_R 66_V 0.76 0.00
260_L 168_P 0.76 0.00
224_A 141_L 0.76 0.00
224_A 15_P 0.76 0.00
198_V 190_N 0.76 0.00
218_L 153_A 0.76 0.00
133_I 147_C 0.76 0.00
304_F 83_Q 0.76 0.00
289_A 187_T 0.75 0.00
293_A 38_I 0.75 0.00
223_E 157_N 0.75 0.00
210_D 42_E 0.75 0.00
145_G 43_H 0.75 0.00
81_N 142_R 0.75 0.00
167_T 202_L 0.75 0.00
287_M 42_E 0.75 0.00
175_R 22_A 0.75 0.00
133_I 6_I 0.74 0.00
181_D 105_L 0.74 0.00
163_I 191_I 0.74 0.00
124_A 111_N 0.74 0.00
227_E 103_T 0.74 0.00
157_R 69_S 0.74 0.00
208_G 93_R 0.74 0.00
312_D 47_F 0.74 0.00
124_A 115_E 0.74 0.00
146_A 191_I 0.74 0.00
165_I 182_W 0.74 0.00
58_A 112_T 0.73 0.00
279_V 159_D 0.73 0.00
242_N 120_A 0.73 0.00
282_D 193_P 0.73 0.00
179_A 167_N 0.73 0.00
164_K 157_N 0.73 0.00
159_K 15_P 0.73 0.00
250_R 141_L 0.72 0.00
293_A 131_V 0.72 0.00
293_A 141_L 0.72 0.00
287_M 44_Y 0.72 0.00
146_A 96_L 0.72 0.00
22_I 42_E 0.72 0.00
218_L 90_N 0.72 0.00
157_R 101_L 0.72 0.00
65_H 131_V 0.72 0.00
111_P 30_R 0.72 0.00
186_T 129_V 0.72 0.00
243_E 114_A 0.72 0.00
218_L 144_R 0.72 0.00
133_I 33_S 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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