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OPENSEQ.org

LPXH - PPIB
UniProt: P43341 - P23869
Length: 404
Sequences: 280
Seq/Len: 0.69
I_Prob: 0.00

LPXH - UDP-2,3-diacylglucosamine hydrolase
Paralog alert: 0.19 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPXH
PPIB - Peptidyl-prolyl cis-trans isomerase B
Paralog alert: 0.66 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PPIA PPIB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
187_Q 135_K 1.29 0.00
77_H 1_M 1.29 0.00
44_E 2_V 1.15 0.00
190_W 35_F 1.11 0.00
44_E 59_M 1.06 0.00
229_T 50_I 1.06 0.00
34_D 161_T 1.06 0.00
5_F 112_G 0.99 0.00
191_L 90_A 0.98 0.00
137_L 61_Q 0.98 0.00
111_L 103_V 0.98 0.00
73_C 31_C 0.96 0.00
34_D 39_T 0.95 0.00
185_K 140_A 0.95 0.00
128_F 127_V 0.95 0.00
182_A 109_N 0.94 0.00
44_E 13_I 0.94 0.00
143_A 33_E 0.94 0.00
98_P 7_N 0.94 0.00
60_A 96_A 0.93 0.00
144_L 159_S 0.93 0.00
218_A 15_T 0.92 0.00
69_S 158_E 0.91 0.00
44_E 116_Q 0.90 0.00
51_D 32_R 0.90 0.00
61_A 156_I 0.89 0.00
96_L 37_N 0.89 0.00
183_M 112_G 0.88 0.00
232_D 67_P 0.87 0.00
89_A 110_F 0.87 0.00
73_C 47_G 0.86 0.00
126_Q 69_K 0.85 0.00
210_P 112_G 0.85 0.00
118_L 147_H 0.85 0.00
112_I 47_G 0.85 0.00
112_I 160_V 0.85 0.00
108_R 35_F 0.85 0.00
240_F 124_A 0.85 0.00
7_A 15_T 0.85 0.00
25_F 23_T 0.84 0.00
121_D 12_V 0.84 0.00
201_V 16_F 0.84 0.00
105_L 127_V 0.84 0.00
44_E 90_A 0.84 0.00
32_K 66_E 0.83 0.00
170_A 128_D 0.83 0.00
133_H 31_C 0.83 0.00
70_G 81_G 0.83 0.00
183_M 68_I 0.83 0.00
153_A 121_C 0.82 0.00
113_M 160_V 0.82 0.00
126_Q 95_T 0.82 0.00
105_L 35_F 0.82 0.00
45_A 112_G 0.82 0.00
30_A 38_N 0.82 0.00
160_S 59_M 0.81 0.00
16_P 96_A 0.81 0.00
75_F 159_S 0.81 0.00
164_N 38_N 0.81 0.00
180_V 128_D 0.81 0.00
139_T 33_E 0.80 0.00
237_H 156_I 0.80 0.00
136_W 114_S 0.80 0.00
37_Y 32_R 0.80 0.00
187_Q 33_E 0.79 0.00
189_Q 90_A 0.79 0.00
178_A 82_T 0.79 0.00
134_K 104_D 0.79 0.00
20_A 162_V 0.78 0.00
126_Q 28_L 0.78 0.00
154_A 127_V 0.78 0.00
210_P 130_M 0.78 0.00
183_M 82_T 0.78 0.00
208_Q 138_G 0.78 0.00
44_E 57_P 0.78 0.00
175_N 4_F 0.77 0.00
192_I 130_M 0.77 0.00
20_A 24_V 0.77 0.00
5_F 28_L 0.77 0.00
160_S 96_A 0.77 0.00
182_A 18_D 0.77 0.00
141_F 58_G 0.77 0.00
106_Y 35_F 0.76 0.00
220_H 77_K 0.76 0.00
117_T 58_G 0.76 0.00
39_L 149_D 0.76 0.00
212_F 164_E 0.75 0.00
124_G 116_Q 0.75 0.00
3_T 3_T 0.75 0.00
226_V 77_K 0.75 0.00
139_T 23_T 0.75 0.00
239_P 113_E 0.74 0.00
143_A 61_Q 0.74 0.00
31_R 104_D 0.74 0.00
238_F 47_G 0.74 0.00
150_K 18_D 0.74 0.00
21_G 127_V 0.74 0.00
18_I 124_A 0.74 0.00
231_D 112_G 0.74 0.00
150_K 95_T 0.73 0.00
225_M 8_H 0.73 0.00
85_G 64_T 0.73 0.00
1_M 162_V 0.73 0.00
104_E 22_E 0.73 0.00
217_G 1_M 0.73 0.00
9_L 118_W 0.73 0.00
185_K 65_K 0.73 0.00
191_L 68_I 0.73 0.00
102_V 138_G 0.73 0.00
103_L 143_R 0.73 0.00
20_A 38_N 0.73 0.00
180_V 153_E 0.72 0.00
233_V 143_R 0.72 0.00
70_G 89_Q 0.72 0.00
157_R 59_M 0.72 0.00
57_R 95_T 0.72 0.00
191_L 103_V 0.72 0.00
47_I 162_V 0.72 0.00
156_M 2_V 0.72 0.00
99_E 159_S 0.72 0.00
92_S 115_L 0.72 0.00
135_P 118_W 0.72 0.00
223_G 106_D 0.71 0.00
210_P 33_E 0.71 0.00
221_T 33_E 0.71 0.00
178_A 77_K 0.71 0.00
12_C 142_G 0.71 0.00
22_F 47_G 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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