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OPENSEQ.org

OBG - PYRH
UniProt: P42641 - P0A7E9
Length: 631
Sequences: 554
Seq/Len: 0.95
I_Prob: 0.00

OBG - GTPase ObgE/CgtA
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: OBG
PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
245_I 194_E 1.20 0.00
240_V 169_G 1.17 0.00
103_E 185_E 1.12 0.00
262_I 232_G 1.10 0.00
41_D 177_K 1.06 0.00
178_A 172_T 1.04 0.00
285_I 162_L 1.03 0.00
132_S 156_I 1.03 0.00
45_V 102_A 1.02 0.00
187_A 200_M 1.01 0.00
313_I 133_I 1.01 0.00
83_G 197_L 0.98 0.00
88_I 149_A 0.98 0.00
180_S 59_N 0.98 0.00
254_D 45_V 0.97 0.00
28_Y 62_R 0.97 0.00
208_S 165_T 0.96 0.00
2_K 200_M 0.95 0.00
50_D 176_A 0.94 0.00
62_E 169_G 0.94 0.00
9_I 217_V 0.94 0.00
178_A 104_L 0.94 0.00
315_A 151_L 0.93 0.00
4_V 41_I 0.92 0.00
90_V 141_P 0.92 0.00
47_M 104_L 0.92 0.00
105_M 149_A 0.91 0.00
46_W 131_V 0.91 0.00
117_V 153_G 0.90 0.00
242_L 200_M 0.90 0.00
278_R 151_L 0.90 0.00
96_V 229_V 0.89 0.00
48_E 171_F 0.88 0.00
41_D 162_L 0.88 0.00
175_F 218_F 0.88 0.00
133_S 41_I 0.88 0.00
38_D 29_I 0.88 0.00
142_T 79_M 0.88 0.00
15_D 134_L 0.87 0.00
235_L 133_I 0.87 0.00
145_T 95_L 0.87 0.00
45_V 28_G 0.87 0.00
74_A 43_E 0.87 0.00
104_T 14_L 0.86 0.00
165_L 52_G 0.86 0.00
319_L 99_Y 0.85 0.00
164_M 106_S 0.85 0.00
111_H 162_L 0.85 0.00
229_I 193_L 0.85 0.00
186_V 19_E 0.85 0.00
152_L 29_I 0.85 0.00
281_V 95_L 0.84 0.00
6_E 165_T 0.84 0.00
183_K 178_D 0.84 0.00
81_K 152_R 0.84 0.00
271_Q 176_A 0.84 0.00
252_G 47_L 0.84 0.00
315_A 95_L 0.84 0.00
269_Y 160_V 0.84 0.00
146_P 104_L 0.83 0.00
328_V 134_L 0.83 0.00
141_K 12_I 0.83 0.00
272_D 174_D 0.83 0.00
81_K 140_N 0.82 0.00
150_R 131_V 0.82 0.00
107_D 62_R 0.82 0.00
23_F 220_M 0.81 0.00
134_V 100_V 0.81 0.00
179_V 204_A 0.81 0.00
105_M 195_K 0.81 0.00
209_F 83_A 0.81 0.00
55_T 161_V 0.81 0.00
334_E 162_L 0.81 0.00
30_P 214_P 0.80 0.00
125_L 219_N 0.80 0.00
132_S 14_L 0.80 0.00
83_G 122_A 0.80 0.00
258_N 78_H 0.80 0.00
321_V 10_K 0.80 0.00
146_P 241_E 0.79 0.00
108_M 124_S 0.79 0.00
177_R 200_M 0.79 0.00
143_N 34_L 0.79 0.00
54_N 20_A 0.79 0.00
274_A 131_V 0.79 0.00
230_R 233_E 0.79 0.00
31_K 95_L 0.79 0.00
183_K 130_R 0.79 0.00
6_E 151_L 0.79 0.00
279_W 167_V 0.79 0.00
306_W 60_L 0.78 0.00
51_E 47_L 0.78 0.00
10_L 162_L 0.78 0.00
20_C 59_N 0.78 0.00
98_D 122_A 0.78 0.00
66_R 53_V 0.78 0.00
21_V 52_G 0.77 0.00
72_N 38_A 0.77 0.00
9_I 218_F 0.77 0.00
104_T 101_N 0.77 0.00
98_D 174_D 0.77 0.00
32_G 165_T 0.77 0.00
150_R 129_N 0.77 0.00
255_P 45_V 0.77 0.00
295_E 182_T 0.77 0.00
159_L 215_I 0.77 0.00
96_V 105_M 0.77 0.00
163_G 174_D 0.77 0.00
46_W 46_E 0.77 0.00
20_C 39_Q 0.77 0.00
174_T 229_V 0.77 0.00
209_F 166_K 0.77 0.00
323_D 202_L 0.76 0.00
59_Y 162_L 0.76 0.00
35_D 131_V 0.76 0.00
236_E 167_V 0.76 0.00
111_H 156_I 0.75 0.00
332_I 12_I 0.75 0.00
68_E 60_L 0.75 0.00
276_K 62_R 0.75 0.00
204_D 115_D 0.75 0.00
13_A 21_L 0.75 0.00
179_V 35_D 0.75 0.00
321_V 24_T 0.75 0.00
256_V 134_L 0.74 0.00
51_E 38_A 0.74 0.00
79_T 16_L 0.74 0.00
175_F 12_I 0.74 0.00
183_K 35_D 0.74 0.00
7_A 162_L 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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