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OPENSEQ.org

NRFF - NRFG
UniProt: P32711 - P32712
Length: 325
Sequences: 347
Seq/Len: 1.13
I_Prob: 0.02

NRFF - Formate-dependent nitrite reductase complex subunit NrfF
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFF
NRFG - Formate-dependent nitrite reductase complex subunit NrfG
Paralog alert: 0.49 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_L 108_E 1.45 0.02
57_A 72_N 1.32 0.01
104_V 183_L 1.31 0.01
79_E 62_L 1.30 0.01
59_V 72_N 1.29 0.01
84_M 160_Y 1.18 0.01
38_I 167_W 1.18 0.01
98_L 97_R 1.17 0.01
115_L 27_L 1.17 0.01
26_F 148_M 1.14 0.01
57_A 26_Y 1.13 0.01
83_W 133_I 1.12 0.01
83_W 151_A 1.11 0.01
94_Y 149_L 1.10 0.01
117_A 130_R 1.09 0.01
54_E 111_A 1.08 0.01
104_V 92_S 1.07 0.01
56_N 82_Y 1.06 0.01
67_V 136_A 1.06 0.01
83_W 106_N 1.06 0.01
57_A 129_T 1.05 0.01
93_R 141_S 1.05 0.01
35_A 115_T 1.05 0.01
53_L 81_E 1.04 0.01
79_E 101_Q 1.02 0.01
45_P 160_Y 1.01 0.01
52_L 179_N 0.99 0.01
46_Q 115_T 0.99 0.01
78_V 161_A 0.99 0.01
95_N 121_A 0.97 0.01
63_M 162_Q 0.97 0.01
54_E 122_S 0.96 0.01
91_F 95_A 0.96 0.01
52_L 148_M 0.95 0.01
60_A 99_A 0.95 0.01
114_L 37_A 0.95 0.01
22_D 155_F 0.95 0.01
45_P 148_M 0.94 0.01
86_E 124_H 0.94 0.01
70_M 179_N 0.93 0.01
52_L 59_L 0.92 0.01
40_S 140_D 0.92 0.01
84_M 143_E 0.92 0.01
38_I 119_Y 0.92 0.01
59_V 145_T 0.92 0.01
57_A 160_Y 0.91 0.01
57_A 30_P 0.91 0.01
46_Q 148_M 0.90 0.00
108_L 81_E 0.90 0.00
54_E 188_N 0.90 0.00
117_A 37_A 0.90 0.00
111_V 187_I 0.90 0.00
80_I 139_L 0.89 0.00
56_N 55_P 0.89 0.00
126_K 21_L 0.88 0.00
114_L 43_R 0.88 0.00
115_L 11_L 0.88 0.00
113_L 86_Q 0.88 0.00
66_Q 179_N 0.88 0.00
103_L 27_L 0.88 0.00
51_N 112_A 0.87 0.00
95_N 131_A 0.87 0.00
63_M 88_D 0.87 0.00
56_N 190_A 0.87 0.00
97_P 149_L 0.86 0.00
38_I 135_K 0.86 0.00
35_A 148_M 0.86 0.00
28_N 80_G 0.85 0.00
37_N 180_R 0.85 0.00
107_A 180_R 0.85 0.00
36_L 18_M 0.85 0.00
21_V 89_Y 0.84 0.00
113_L 24_G 0.84 0.00
93_R 156_M 0.84 0.00
35_A 81_E 0.84 0.00
50_Q 152_S 0.84 0.00
23_T 191_K 0.84 0.00
59_V 30_P 0.84 0.00
63_M 44_D 0.84 0.00
37_N 171_M 0.83 0.00
94_Y 35_V 0.83 0.00
70_M 149_L 0.83 0.00
126_K 20_F 0.83 0.00
20_V 75_Q 0.83 0.00
122_R 88_D 0.82 0.00
111_V 99_A 0.82 0.00
50_Q 141_S 0.82 0.00
34_Q 88_D 0.82 0.00
110_V 94_L 0.82 0.00
92_V 76_W 0.82 0.00
83_W 76_W 0.82 0.00
28_N 165_E 0.82 0.00
84_M 147_L 0.81 0.00
90_D 148_M 0.81 0.00
93_R 59_L 0.81 0.00
40_S 118_Y 0.81 0.00
24_W 148_M 0.81 0.00
97_P 76_W 0.80 0.00
118_L 16_I 0.80 0.00
80_I 170_V 0.80 0.00
125_A 107_A 0.80 0.00
116_M 10_M 0.80 0.00
116_M 78_L 0.80 0.00
48_Q 66_I 0.80 0.00
40_S 135_K 0.80 0.00
84_M 35_V 0.80 0.00
31_Q 83_Y 0.80 0.00
82_G 16_I 0.80 0.00
86_E 16_I 0.80 0.00
33_Q 56_E 0.80 0.00
101_Q 186_S 0.79 0.00
108_L 44_D 0.79 0.00
32_Q 38_E 0.79 0.00
63_M 19_V 0.79 0.00
36_L 61_A 0.79 0.00
97_P 62_L 0.79 0.00
115_L 40_Q 0.79 0.00
45_P 118_Y 0.79 0.00
79_E 103_R 0.79 0.00
46_Q 179_N 0.78 0.00
93_R 64_D 0.78 0.00
89_G 144_I 0.78 0.00
119_I 94_L 0.78 0.00
102_T 101_Q 0.78 0.00
104_V 75_Q 0.78 0.00
70_M 166_L 0.78 0.00
118_L 188_N 0.78 0.00
98_L 98_Q 0.78 0.00
99_T 150_L 0.78 0.00
108_L 132_M 0.78 0.00
36_L 115_T 0.77 0.00
22_D 157_Q 0.77 0.00
37_N 181_T 0.77 0.00
112_L 28_L 0.77 0.00
127_R 43_R 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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