| UniProt: | P32711 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11949 | ||
| Length: | 127 (120) | ||
| Sequences: | 619 | ||
| Seq/Len: | 5.16 |
| NRFF
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 34_Q | 77_E | 3.029 | 1.00 | |
| 90_D | 97_P | 2.876 | 1.00 | |
| 45_P | 59_V | 2.389 | 1.00 | |
| 98_L | 107_A | 2.354 | 1.00 | |
| 82_G | 86_E | 2.192 | 1.00 | |
| 31_Q | 71_V | 2.102 | 1.00 | |
| 50_Q | 56_N | 2.074 | 1.00 | |
| 90_D | 99_T | 2.073 | 1.00 | |
| 70_M | 75_K | 1.998 | 1.00 | |
| 78_V | 82_G | 1.979 | 1.00 | |
| 46_Q | 59_V | 1.9 | 1.00 | |
| 97_P | 102_T | 1.87 | 1.00 | |
| 75_K | 79_E | 1.844 | 1.00 | |
| 63_M | 84_M | 1.721 | 1.00 | |
| 35_A | 39_A | 1.692 | 1.00 | |
| 49_N | 91_F | 1.606 | 0.99 | |
| 100_G | 103_L | 1.589 | 0.99 | |
| 48_Q | 91_F | 1.56 | 0.99 | |
| 123_V | 126_K | 1.537 | 0.99 | |
| 66_Q | 70_M | 1.479 | 0.98 | |
| 37_N | 77_E | 1.475 | 0.98 | |
| 98_L | 102_T | 1.467 | 0.98 | |
| 83_W | 88_Y | 1.388 | 0.97 | |
| 39_A | 52_L | 1.349 | 0.97 | |
| 8_L | 11_L | 1.337 | 0.97 | |
| 22_D | 26_F | 1.335 | 0.96 | |
| 66_Q | 83_W | 1.321 | 0.96 | |
| 98_L | 103_L | 1.289 | 0.95 | |
| 11_L | 14_C | 1.272 | 0.95 | |
| 40_S | 51_N | 1.261 | 0.95 | |
| 117_A | 121_W | 1.256 | 0.95 | |
| 41_Q | 95_N | 1.244 | 0.94 | |
| 23_T | 27_A | 1.241 | 0.94 | |
| 67_V | 92_V | 1.232 | 0.94 | |
| 60_A | 88_Y | 1.224 | 0.94 | |
| 50_Q | 54_E | 1.219 | 0.93 | |
| 66_Q | 84_M | 1.194 | 0.92 | |
| 69_S | 73_E | 1.162 | 0.91 | |
| 27_A | 72_A | 1.133 | 0.90 | |
| 36_L | 53_L | 1.109 | 0.88 | |
| 35_A | 68_Y | 1.108 | 0.88 | |
| 8_L | 14_C | 1.083 | 0.86 | |
| 70_M | 73_E | 1.083 | 0.86 | |
| 35_A | 53_L | 1.082 | 0.86 | |
| 37_N | 41_Q | 1.078 | 0.86 | |
| 53_L | 94_Y | 1.071 | 0.86 | |
| 21_V | 26_F | 1.07 | 0.86 | |
| 118_L | 121_W | 1.065 | 0.85 | |
| 67_V | 80_I | 1.06 | 0.85 | |
| 32_Q | 68_Y | 1.059 | 0.85 | |
| 83_W | 93_R | 1.053 | 0.84 | |
| 26_F | 68_Y | 1.048 | 0.84 | |
| 49_N | 63_M | 1.044 | 0.84 | |
| 8_L | 13_T | 1.021 | 0.82 | |
| 9_L | 14_C | 1.021 | 0.82 | |
| 66_Q | 69_S | 1.012 | 0.81 | |
| 20_V | 23_T | 1.005 | 0.80 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2hl7A | 1 | 0.6614 | 100 | 0.306 | Contact Map | 0.424 |
| 2kw0A | 1 | 0.7087 | 100 | 0.309 | Contact Map | 0.48 |
| 1w5cT | 2 | 0.7323 | 37.8 | 0.931 | Contact Map | 0.086 |
| 1odfA | 1 | 0.9685 | 27.9 | 0.935 | Contact Map | 0.121 |
| 1c2nA | 1 | 0.8504 | 24.1 | 0.937 | Contact Map | 0.135 |
| 2blfB | 1 | 0.5748 | 18 | 0.941 | Contact Map | 0.25 |
| 3o0rC | 1 | 0.9213 | 17.2 | 0.941 | Contact Map | 0.1 |
| 2vxgA | 2 | 0.4803 | 11.7 | 0.945 | Contact Map | 0.38 |
| 4fasA | 3 | 0.5039 | 9 | 0.948 | Contact Map | 0.212 |
| 4aybP | 1 | 0.3465 | 7.5 | 0.95 | Contact Map | 0 |
Sequence Conservation (Image Generated using WebLogo v3)