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HOLB - YBAB
UniProt: P28631 - P0A8B5
Length: 443
Sequences: 819
Seq/Len: 1.96
I_Prob: 0.20

HOLB - DNA polymerase III subunit delta'
Paralog alert: 0.69 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: HOLB
YBAB - Nucleoid-associated protein YbaB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBAB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
198_P 11_M 1.41 0.20
109_A 84_I 1.26 0.13
128_L 48_G 1.09 0.08
67_L 6_G 1.04 0.07
109_A 101_L 0.97 0.05
259_H 83_R 0.97 0.05
140_W 70_E 0.95 0.05
240_Q 55_V 0.94 0.05
313_T 48_G 0.93 0.04
70_A 95_V 0.91 0.04
39_A 57_I 0.90 0.04
197_S 16_Q 0.85 0.03
100_L 12_K 0.85 0.03
143_L 50_H 0.83 0.03
48_L 29_A 0.83 0.03
102_E 32_E 0.83 0.03
286_L 31_L 0.82 0.03
11_F 28_I 0.82 0.03
15_V 77_F 0.80 0.03
224_V 105_F 0.80 0.03
12_E 45_T 0.80 0.03
27_L 14_A 0.80 0.03
176_L 84_I 0.79 0.03
47_Y 77_F 0.79 0.03
272_G 104_G 0.78 0.03
111_V 69_L 0.77 0.02
195_A 10_L 0.77 0.02
137_A 39_A 0.77 0.02
77_Y 92_M 0.77 0.02
217_C 37_S 0.76 0.02
319_I 45_T 0.76 0.02
21_G 30_Q 0.75 0.02
74_P 54_R 0.75 0.02
148_P 105_F 0.74 0.02
255_A 73_V 0.73 0.02
81_P 85_E 0.73 0.02
139_T 80_A 0.73 0.02
253_M 62_L 0.73 0.02
39_A 75_A 0.72 0.02
51_Q 38_G 0.71 0.02
195_A 101_L 0.71 0.02
319_I 17_M 0.71 0.02
214_E 73_V 0.71 0.02
110_K 95_V 0.71 0.02
174_T 70_E 0.71 0.02
43_A 95_V 0.71 0.02
20_A 8_G 0.71 0.02
237_N 27_E 0.70 0.02
159_C 38_G 0.70 0.02
253_M 66_K 0.70 0.02
254_D 35_G 0.70 0.02
228_D 44_V 0.69 0.02
305_G 40_G 0.69 0.02
155_L 63_E 0.69 0.02
201_A 12_K 0.69 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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