| UniProt: | P0A8B5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11100 | ||
| Length: | 109 (106) | ||
| Sequences: | 1249 | ||
| Seq/Len: | 11.78 |
| YBAB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 62_L | 66_K | 2.717 | 1.00 | |
| 23_K | 27_E | 2.554 | 1.00 | |
| 46_I | 52_C | 2.479 | 1.00 | |
| 33_V | 87_T | 2.27 | 1.00 | |
| 22_Q | 26_E | 2.158 | 1.00 | |
| 20_K | 23_K | 2.12 | 1.00 | |
| 50_H | 85_E | 2.098 | 1.00 | |
| 47_N | 53_R | 2.096 | 1.00 | |
| 32_E | 45_T | 2.062 | 1.00 | |
| 43_K | 56_E | 2.008 | 1.00 | |
| 34_T | 43_K | 2.002 | 1.00 | |
| 16_Q | 20_K | 1.933 | 1.00 | |
| 31_L | 91_K | 1.901 | 1.00 | |
| 26_E | 29_A | 1.871 | 1.00 | |
| 29_A | 49_A | 1.835 | 1.00 | |
| 35_G | 79_D | 1.835 | 1.00 | |
| 91_K | 94_S | 1.791 | 1.00 | |
| 59_P | 66_K | 1.738 | 1.00 | |
| 36_E | 43_K | 1.708 | 1.00 | |
| 34_T | 45_T | 1.657 | 1.00 | |
| 46_I | 80_A | 1.589 | 1.00 | |
| 56_E | 70_E | 1.585 | 1.00 | |
| 10_L | 14_A | 1.577 | 1.00 | |
| 51_N | 82_R | 1.553 | 1.00 | |
| 50_H | 84_I | 1.537 | 1.00 | |
| 19_E | 23_K | 1.521 | 1.00 | |
| 32_E | 53_R | 1.52 | 1.00 | |
| 86_E | 90_E | 1.515 | 1.00 | |
| 31_L | 87_T | 1.498 | 1.00 | |
| 52_C | 77_F | 1.472 | 1.00 | |
| 44_V | 55_V | 1.457 | 1.00 | |
| 46_I | 81_A | 1.455 | 1.00 | |
| 44_V | 77_F | 1.454 | 1.00 | |
| 65_D | 68_M | 1.397 | 0.99 | |
| 79_D | 83_R | 1.388 | 0.99 | |
| 27_E | 91_K | 1.385 | 0.99 | |
| 44_V | 52_C | 1.363 | 0.99 | |
| 45_T | 53_R | 1.357 | 0.99 | |
| 27_E | 31_L | 1.33 | 0.99 | |
| 61_L | 69_L | 1.319 | 0.99 | |
| 45_T | 54_R | 1.282 | 0.99 | |
| 26_E | 30_Q | 1.278 | 0.99 | |
| 82_R | 86_E | 1.263 | 0.99 | |
| 13_Q | 16_Q | 1.25 | 0.99 | |
| 79_D | 82_R | 1.238 | 0.98 | |
| 66_K | 70_E | 1.226 | 0.98 | |
| 46_I | 84_I | 1.171 | 0.98 | |
| 16_Q | 19_E | 1.159 | 0.97 | |
| 27_E | 30_Q | 1.119 | 0.96 | |
| 48_G | 84_I | 1.116 | 0.96 | |
| 37_S | 75_A | 1.095 | 0.96 | |
| 31_L | 48_G | 1.094 | 0.96 | |
| 54_R | 70_E | 1.091 | 0.96 | |
| 43_K | 58_D | 1.089 | 0.96 | |
| 35_G | 76_A | 1.064 | 0.95 | |
| 55_V | 74_A | 1.054 | 0.95 | |
| 57_I | 73_V | 1.042 | 0.94 | |
| 33_V | 46_I | 1.04 | 0.94 | |
| 38_G | 75_A | 1.028 | 0.94 | |
| 42_V | 73_V | 1.026 | 0.94 | |
| 19_E | 22_Q | 1.009 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1j8bA | 1 | 1 | 100 | 0.084 | Contact Map | 0.67 |
| 1ybxA | 2 | 0.9633 | 100 | 0.148 | Contact Map | 0.805 |
| 3f42A | 2 | 0.8991 | 100 | 0.22 | Contact Map | 0.724 |
| 3oeqA | 1 | 0.7798 | 11.8 | 0.924 | Contact Map | 0.292 |
| 4ev6A | 5 | 0.9908 | 10.6 | 0.926 | Contact Map | 0.409 |
| 4i0uA | 10 | 0.9908 | 8.5 | 0.929 | Contact Map | 0.474 |
| 2kzxA | 1 | 0.7156 | 7.6 | 0.931 | Contact Map | 0.562 |
| 1yduA | 1 | 0.6422 | 5.9 | 0.934 | Contact Map | 0.016 |
| 2kzfA | 1 | 0.8349 | 5 | 0.936 | Contact Map | 0.179 |
| 4imiA | 2 | 0.4679 | 4.2 | 0.939 | Contact Map | 0.694 |
Sequence Conservation (Image Generated using WebLogo v3)