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HOLA - YBAB
UniProt: P28630 - P0A8B5
Length: 452
Sequences: 843
Seq/Len: 1.97
I_Prob: 0.03

HOLA - DNA polymerase III subunit delta
Paralog alert: 0.85 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: HOLA
YBAB - Nucleoid-associated protein YbaB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBAB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
178_L 11_M 1.23 0.03
77_R 84_I 1.23 0.03
97_L 48_G 1.16 0.02
200_P 73_V 1.15 0.02
77_R 101_L 1.12 0.02
233_L 99_M 1.11 0.02
325_E 48_G 1.07 0.02
159_N 26_E 1.03 0.01
109_L 70_E 0.98 0.01
177_N 16_Q 0.94 0.01
21_Y 14_A 0.94 0.01
57_P 85_E 0.94 0.01
240_G 105_F 0.93 0.01
156_K 95_V 0.92 0.01
108_L 80_A 0.91 0.01
79_T 69_L 0.90 0.01
284_G 104_G 0.90 0.01
68_C 12_K 0.89 0.01
15_E 30_Q 0.89 0.01
10_R 77_F 0.88 0.01
221_L 27_E 0.87 0.01
255_L 66_K 0.87 0.01
112_V 50_H 0.87 0.01
277_R 10_L 0.86 0.01
222_L 57_I 0.86 0.01
232_I 86_E 0.85 0.01
70_A 32_E 0.85 0.01
11_A 64_D 0.84 0.01
255_L 62_L 0.84 0.01
41_V 77_F 0.83 0.01
121_Q 106_K 0.83 0.01
211_H 7_L 0.82 0.01
42_A 29_A 0.81 0.01
33_E 57_I 0.81 0.01
242_E 55_V 0.81 0.01
261_K 55_V 0.80 0.01
157_Q 86_E 0.79 0.01
246_L 55_V 0.79 0.01
60_D 48_G 0.78 0.01
283_R 37_S 0.77 0.01
286_M 41_L 0.77 0.01
37_A 95_V 0.77 0.01
199_L 10_L 0.76 0.01
217_W 33_V 0.76 0.01
321_W 38_G 0.76 0.01
93_I 34_T 0.76 0.01
66_S 97_S 0.75 0.01
261_K 83_R 0.75 0.01
121_Q 32_E 0.75 0.01
79_T 64_D 0.74 0.01
290_L 59_P 0.74 0.01
177_N 10_L 0.74 0.01
19_A 92_M 0.74 0.01
106_D 39_A 0.72 0.01
262_R 52_C 0.72 0.01
331_L 45_T 0.72 0.01
33_E 75_A 0.72 0.01
76_S 37_S 0.72 0.01
230_L 7_L 0.72 0.01
59_T 42_V 0.71 0.01
154_R 57_I 0.71 0.01
79_T 17_M 0.71 0.01
304_L 74_A 0.70 0.01
53_F 92_M 0.70 0.01
285_M 73_V 0.70 0.01
294_S 45_T 0.70 0.01
249_T 51_N 0.70 0.01
155_A 91_K 0.70 0.01
174_Y 19_E 0.70 0.01
175_E 101_L 0.70 0.01
151_V 84_I 0.69 0.01
134_S 38_G 0.69 0.01
228_R 101_L 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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