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OPENSEQ.org

ACPS - RNC
UniProt: P24224 - P0A7Y0
Length: 352
Sequences: 307
Seq/Len: 0.89
I_Prob: 0.02

ACPS - Holo-[acyl-carrier-protein] synthase
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ACPS
RNC - Ribonuclease 3
Paralog alert: 0.05 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 164_L 1.55 0.02
109_V 92_E 1.43 0.01
108_H 120_I 1.42 0.01
110_T 221_K 1.35 0.01
23_S 15_Y 1.24 0.01
54_F 205_G 1.24 0.01
112_A 152_K 1.24 0.01
74_F 15_Y 1.20 0.01
30_R 217_E 1.18 0.01
30_R 185_D 1.17 0.01
111_L 123_V 1.17 0.01
109_V 190_I 1.16 0.01
111_L 91_G 1.16 0.01
111_L 96_L 1.13 0.01
113_D 156_P 1.13 0.01
116_H 71_M 1.12 0.01
81_N 201_V 1.12 0.01
38_A 124_F 1.09 0.01
74_F 43_L 1.09 0.01
13_I 106_F 1.08 0.01
54_F 70_R 1.08 0.01
28_A 183_A 1.07 0.01
21_A 134_K 1.06 0.01
95_A 78_G 1.06 0.01
89_L 159_R 1.03 0.01
29_R 52_I 1.03 0.01
32_L 72_R 1.03 0.00
1_M 150_G 1.03 0.00
66_T 14_G 1.02 0.00
32_L 192_C 1.02 0.00
95_A 32_A 1.02 0.00
25_D 202_V 1.02 0.00
113_D 172_P 1.02 0.00
22_R 51_V 1.01 0.00
6_L 85_A 1.01 0.00
8_T 192_C 1.01 0.00
106_N 51_V 1.00 0.00
54_F 57_Y 0.99 0.00
114_E 98_P 0.99 0.00
32_L 140_Y 0.99 0.00
79_V 167_R 0.99 0.00
111_L 86_R 0.98 0.00
97_K 133_E 0.96 0.00
2_A 150_G 0.95 0.00
46_P 113_A 0.95 0.00
101_K 13_L 0.95 0.00
74_F 12_K 0.95 0.00
75_N 52_I 0.94 0.00
31_V 53_A 0.94 0.00
24_G 203_G 0.93 0.00
25_D 94_L 0.93 0.00
16_I 190_I 0.93 0.00
89_L 53_A 0.92 0.00
114_E 73_A 0.92 0.00
50_L 72_R 0.92 0.00
114_E 81_L 0.92 0.00
71_G 78_G 0.92 0.00
90_R 177_V 0.91 0.00
14_A 47_I 0.91 0.00
112_A 10_Q 0.91 0.00
114_E 208_R 0.91 0.00
14_A 163_Y 0.90 0.00
114_E 38_E 0.90 0.00
47_V 115_T 0.90 0.00
68_I 60_F 0.90 0.00
27_L 25_Q 0.90 0.00
21_A 136_I 0.90 0.00
19_V 64_D 0.89 0.00
60_A 49_S 0.88 0.00
86_K 205_G 0.88 0.00
12_E 101_L 0.87 0.00
31_V 118_A 0.87 0.00
34_D 185_D 0.87 0.00
25_D 89_E 0.87 0.00
26_R 95_R 0.87 0.00
79_V 159_R 0.87 0.00
91_L 222_K 0.86 0.00
110_T 108_R 0.86 0.00
120_A 82_A 0.86 0.00
113_D 209_R 0.86 0.00
76_Q 168_H 0.85 0.00
16_I 58_H 0.85 0.00
70_N 129_I 0.85 0.00
22_R 114_D 0.85 0.00
54_F 52_I 0.85 0.00
32_L 208_R 0.84 0.00
68_I 171_L 0.84 0.00
64_F 75_L 0.84 0.00
18_A 173_T 0.84 0.00
121_T 63_V 0.84 0.00
8_T 209_R 0.83 0.00
107_M 224_E 0.83 0.00
6_L 197_L 0.83 0.00
68_I 203_G 0.83 0.00
68_I 9_L 0.83 0.00
18_A 10_Q 0.83 0.00
31_V 205_G 0.83 0.00
121_T 49_S 0.83 0.00
99_A 84_L 0.83 0.00
11_V 43_L 0.83 0.00
86_K 123_V 0.82 0.00
114_E 99_G 0.82 0.00
89_L 158_T 0.82 0.00
101_K 53_A 0.82 0.00
110_T 220_L 0.82 0.00
54_F 217_E 0.82 0.00
2_A 71_M 0.82 0.00
48_R 205_G 0.82 0.00
68_I 143_R 0.82 0.00
88_R 52_I 0.82 0.00
99_A 217_E 0.82 0.00
2_A 223_L 0.81 0.00
80_F 205_G 0.81 0.00
100_E 204_T 0.81 0.00
70_N 60_F 0.81 0.00
121_T 203_G 0.81 0.00
52_K 80_T 0.81 0.00
28_A 192_C 0.81 0.00
112_A 177_V 0.80 0.00
95_A 139_W 0.80 0.00
77_F 91_G 0.80 0.00
50_L 186_Q 0.80 0.00
28_A 164_L 0.80 0.00
109_V 67_D 0.80 0.00
112_A 85_A 0.79 0.00
21_A 19_H 0.79 0.00
44_H 130_Q 0.79 0.00
29_R 16_T 0.79 0.00
109_V 135_L 0.78 0.00
52_K 60_F 0.78 0.00
1_M 71_M 0.78 0.00
60_A 82_A 0.78 0.00
23_S 180_R 0.78 0.00
33_S 61_P 0.78 0.00
71_G 86_R 0.78 0.00
42_T 11_R 0.78 0.00
110_T 100_E 0.78 0.00
120_A 14_G 0.77 0.00
74_F 8_R 0.77 0.00
53_R 114_D 0.77 0.00
75_N 61_P 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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