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OPENSEQ.org

ACPS - PDXJ
UniProt: P24224 - P0A794
Length: 369
Sequences: 311
Seq/Len: 0.85
I_Prob: 0.02

ACPS - Holo-[acyl-carrier-protein] synthase
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ACPS
PDXJ - Pyridoxine 5'-phosphate synthase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PDXJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 190_N 1.57 0.02
52_K 182_A 1.46 0.01
22_R 126_A 1.17 0.01
11_V 154_I 1.14 0.01
73_A 206_I 1.12 0.01
95_A 26_D 1.07 0.01
25_D 165_D 1.06 0.01
82_D 61_L 1.05 0.01
22_R 127_G 1.03 0.00
49_F 13_I 1.03 0.00
52_K 134_I 1.00 0.00
22_R 207_P 1.00 0.00
50_L 69_M 0.99 0.00
17_E 125_D 0.98 0.00
113_D 21_G 0.98 0.00
2_A 151_F 0.97 0.00
18_A 117_R 0.97 0.00
123_I 108_D 0.97 0.00
121_T 151_F 0.96 0.00
123_I 136_A 0.96 0.00
54_F 128_I 0.96 0.00
28_A 190_N 0.96 0.00
38_A 165_D 0.96 0.00
20_I 233_E 0.95 0.00
52_K 21_G 0.95 0.00
102_L 97_K 0.94 0.00
34_D 13_I 0.93 0.00
31_V 110_A 0.93 0.00
71_G 27_P 0.92 0.00
24_G 179_A 0.92 0.00
27_L 91_C 0.92 0.00
70_N 116_M 0.92 0.00
68_I 112_Q 0.92 0.00
27_L 4_L 0.92 0.00
69_R 152_I 0.92 0.00
42_T 117_R 0.91 0.00
60_A 56_R 0.91 0.00
91_L 222_A 0.91 0.00
8_T 152_I 0.90 0.00
97_K 110_A 0.89 0.00
94_E 71_L 0.89 0.00
113_D 24_Y 0.89 0.00
52_K 203_I 0.89 0.00
24_G 127_G 0.89 0.00
49_F 190_N 0.88 0.00
121_T 64_T 0.88 0.00
26_R 145_A 0.87 0.00
32_L 68_R 0.87 0.00
50_L 160_A 0.87 0.00
95_A 56_R 0.87 0.00
21_A 117_R 0.86 0.00
107_M 80_L 0.86 0.00
19_V 206_I 0.86 0.00
99_A 151_F 0.86 0.00
64_F 80_L 0.86 0.00
121_T 56_R 0.86 0.00
10_I 238_M 0.86 0.00
101_K 136_A 0.85 0.00
20_I 201_K 0.85 0.00
60_A 29_Q 0.85 0.00
34_D 137_D 0.85 0.00
113_D 92_C 0.84 0.00
61_A 178_A 0.84 0.00
22_R 138_E 0.84 0.00
71_G 73_M 0.83 0.00
40_W 190_N 0.83 0.00
115_R 62_R 0.83 0.00
112_A 188_K 0.83 0.00
55_A 19_A 0.82 0.00
118_A 111_G 0.82 0.00
56_V 188_K 0.82 0.00
110_T 138_E 0.81 0.00
79_V 163_K 0.81 0.00
20_I 241_A 0.81 0.00
24_G 207_P 0.81 0.00
52_K 141_I 0.80 0.00
48_R 120_C 0.80 0.00
8_T 136_A 0.80 0.00
108_H 216_H 0.80 0.00
121_T 32_F 0.80 0.00
114_E 202_A 0.80 0.00
75_N 16_L 0.80 0.00
72_L 36_Q 0.79 0.00
89_L 71_L 0.79 0.00
77_F 18_N 0.79 0.00
11_V 152_I 0.79 0.00
84_L 16_L 0.79 0.00
103_G 168_Q 0.79 0.00
98_L 71_L 0.78 0.00
14_A 172_L 0.78 0.00
110_T 183_A 0.78 0.00
23_S 223_V 0.78 0.00
109_V 187_L 0.78 0.00
31_V 99_Q 0.78 0.00
10_I 44_V 0.78 0.00
124_I 18_N 0.78 0.00
76_Q 84_V 0.78 0.00
113_D 217_A 0.77 0.00
33_S 154_I 0.77 0.00
13_I 159_Y 0.77 0.00
6_L 129_Q 0.76 0.00
14_A 179_A 0.76 0.00
45_Q 150_P 0.76 0.00
39_I 87_K 0.76 0.00
31_V 223_V 0.76 0.00
32_L 58_V 0.75 0.00
14_A 91_C 0.75 0.00
13_I 41_G 0.75 0.00
108_H 127_G 0.75 0.00
2_A 129_Q 0.75 0.00
46_P 230_A 0.75 0.00
95_A 41_G 0.75 0.00
78_E 80_L 0.75 0.00
112_A 120_C 0.74 0.00
110_T 136_A 0.74 0.00
104_V 231_V 0.74 0.00
113_D 200_V 0.74 0.00
27_L 185_L 0.74 0.00
77_F 135_D 0.73 0.00
27_L 129_Q 0.73 0.00
18_A 101_V 0.73 0.00
110_T 228_K 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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