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OPENSEQ.org
PDXA - RSMA
UniProt: P19624 - P06992
Length: 602
Sequences: 418
Seq/Len: 0.71
I_Prob: 0.06
PDXA - 4-hydroxythreonine-4-phosphate dehydrogenase
Paralog alert: 0.21 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PDXA 		RSMA - Ribosomal RNA small subunit methyltransferase A
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
139_F 93_M 1.74 0.06
154_A 190_A 1.56 0.04
149_V 190_A 1.29 0.02
117_I 260_M 1.24 0.01
91_V 93_M 1.15 0.01
302_E 180_A 1.14 0.01
195_K 190_A 1.12 0.01
154_A 122_L 1.10 0.01
260_A 212_R 1.09 0.01
131_I 62_L 1.09 0.01
10_T 14_R 1.09 0.01
133_F 94_T 1.08 0.01
101_L 33_I 1.07 0.01
327_N 213_I 1.05 0.01
303_L 145_V 1.05 0.01
21_L 111_F 1.03 0.01
295_V 138_F 1.03 0.01
162_L 112_G 1.02 0.01
176_I 184_P 1.02 0.01
7_V 213_I 1.02 0.01
149_V 165_Q 1.01 0.01
174_D 239_T 1.00 0.01
109_L 128_S 1.00 0.01
23_V 174_L 1.00 0.01
316_T 64_V 0.99 0.01
132_P 51_L 0.99 0.01
291_I 231_N 0.99 0.01
192_L 236_E 0.99 0.01
179_A 255_A 0.99 0.01
61_P 257_Y 0.98 0.01
230_L 226_R 0.97 0.01
146_A 51_L 0.96 0.01
303_L 142_K 0.96 0.01
277_G 168_C 0.96 0.01
71_G 224_T 0.95 0.01
154_A 18_N 0.95 0.01
24_Q 65_I 0.94 0.01
61_P 252_I 0.93 0.01
260_A 180_A 0.93 0.01
172_I 177_P 0.92 0.01
108_C 25_V 0.92 0.01
17_I 38_G 0.91 0.01
318_L 212_R 0.91 0.01
282_V 250_E 0.91 0.01
281_G 198_A 0.91 0.01
324_M 240_G 0.91 0.01
149_V 139_M 0.91 0.01
101_L 176_V 0.91 0.01
20_D 120_T 0.90 0.01
162_L 71_L 0.90 0.01
52_L 203_P 0.90 0.01
181_L 121_P 0.90 0.01
93_N 109_R 0.90 0.01
162_L 18_N 0.90 0.01
222_E 65_I 0.89 0.01
306_R 57_E 0.89 0.01
238_M 256_Q 0.88 0.00
94_G 73_A 0.88 0.00
116_L 109_R 0.88 0.00
229_V 261_A 0.88 0.00
162_L 133_I 0.87 0.00
144_S 93_M 0.87 0.00
160_V 206_D 0.87 0.00
51_G 31_S 0.87 0.00
173_A 90_Q 0.87 0.00
103_R 260_M 0.86 0.00
86_A 254_V 0.86 0.00
218_M 107_P 0.86 0.00
218_M 137_H 0.86 0.00
295_V 50_A 0.86 0.00
13_E 12_R 0.86 0.00
58_P 61_Q 0.86 0.00
324_M 44_I 0.85 0.00
114_A 154_S 0.85 0.00
273_L 121_P 0.85 0.00
238_M 205_K 0.85 0.00
149_V 178_P 0.85 0.00
100_T 15_F 0.85 0.00
162_L 163_M 0.85 0.00
65_A 198_A 0.84 0.00
121_V 33_I 0.84 0.00
37_C 56_G 0.84 0.00
103_R 212_R 0.84 0.00
306_R 238_L 0.84 0.00
81_R 243_I 0.84 0.00
218_M 136_M 0.83 0.00
37_C 254_V 0.83 0.00
320_L 110_V 0.83 0.00
162_L 166_Y 0.83 0.00
295_V 126_L 0.83 0.00
133_F 44_I 0.83 0.00
17_I 216_E 0.83 0.00
45_N 77_T 0.83 0.00
261_V 72_A 0.83 0.00
98_V 95_F 0.83 0.00
93_N 177_P 0.83 0.00
119_G 190_A 0.83 0.00
311_V 267_N 0.83 0.00
140_F 78_H 0.82 0.00
316_T 146_N 0.82 0.00
17_I 231_N 0.82 0.00
98_V 176_V 0.82 0.00
176_I 198_A 0.82 0.00
158_L 122_L 0.82 0.00
234_R 87_I 0.82 0.00
195_K 165_Q 0.82 0.00
52_L 57_E 0.82 0.00
119_G 165_Q 0.82 0.00
258_A 85_L 0.81 0.00
114_A 195_V 0.81 0.00
94_G 74_R 0.81 0.00
103_R 73_A 0.81 0.00
60_S 161_S 0.81 0.00
109_L 101_A 0.81 0.00
48_A 61_Q 0.81 0.00
108_C 49_A 0.81 0.00
154_A 67_L 0.81 0.00
178_P 198_A 0.81 0.00
78_V 73_A 0.80 0.00
147_K 195_V 0.80 0.00
225_T 266_E 0.80 0.00
117_I 162_V 0.80 0.00
107_G 109_R 0.80 0.00
272_V 138_F 0.80 0.00
104_A 254_V 0.80 0.00
65_A 87_I 0.80 0.00
311_V 65_I 0.80 0.00
260_A 194_L 0.80 0.00
262_L 176_V 0.80 0.00
180_L 149_V 0.80 0.00
249_L 92_A 0.80 0.00
127_N 227_N 0.80 0.00
69_T 267_N 0.79 0.00
272_V 140_L 0.79 0.00
176_I 112_G 0.79 0.00
171_D 198_A 0.79 0.00
290_F 178_P 0.79 0.00
15_A 121_P 0.79 0.00
204_L 127_F 0.79 0.00
39_D 177_P 0.79 0.00
140_F 56_G 0.79 0.00
7_V 179_S 0.78 0.00
171_D 260_M 0.78 0.00
103_R 107_P 0.78 0.00
99_E 25_V 0.78 0.00
99_E 199_T 0.78 0.00
10_T 90_Q 0.78 0.00
86_A 28_S 0.78 0.00
170_R 106_Q 0.78 0.00
52_L 206_D 0.78 0.00
163_A 215_T 0.78 0.00
105_C 257_Y 0.77 0.00
199_A 244_D 0.77 0.00
321_A 51_L 0.77 0.00
167_L 125_H 0.77 0.00
129_A 142_K 0.77 0.00
303_L 168_C 0.77 0.00
162_L 15_F 0.77 0.00
122_H 155_K 0.77 0.00
33_E 51_L 0.77 0.00
291_I 129_Y 0.77 0.00
98_V 24_F 0.77 0.00
206_C 149_V 0.77 0.00
76_L 249_A 0.77 0.00
134_T 96_N 0.77 0.00
155_T 71_L 0.77 0.00
25_L 156_A 0.77 0.00
295_V 135_D 0.76 0.00
88_Q 195_V 0.76 0.00
161_A 112_G 0.76 0.00
318_L 154_S 0.76 0.00
127_N 140_L 0.76 0.00
143_R 58_R 0.76 0.00
107_G 135_D 0.76 0.00
173_A 41_M 0.76 0.00
125_V 136_M 0.76 0.00
19_P 18_N 0.76 0.00
117_I 196_P 0.76 0.00
35_V 118_I 0.76 0.00
172_I 153_N 0.76 0.00
99_E 230_G 0.76 0.00
81_R 242_G 0.76 0.00
76_L 94_T 0.75 0.00
128_D 260_M 0.75 0.00
45_N 146_N 0.75 0.00
152_M 109_R 0.75 0.00
27_Q 234_S 0.75 0.00
191_D 87_I 0.75 0.00
119_G 51_L 0.75 0.00
310_D 153_N 0.75 0.00
83_P 264_L 0.75 0.00
290_F 24_F 0.75 0.00
179_A 96_N 0.75 0.00
125_V 246_A 0.75 0.00
241_N 232_L 0.75 0.00
295_V 26_I 0.75 0.00
172_I 137_H 0.75 0.00
134_T 50_A 0.75 0.00
110_N 107_P 0.75 0.00
170_R 61_Q 0.75 0.00
215_G 134_A 0.74 0.00
131_I 59_L 0.74 0.00
275_Y 97_F 0.74 0.00
139_F 51_L 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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