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OPENSEQ.org

BIOD1 - BIOF
UniProt: P13000 - P12998
Length: 609
Sequences: 698
Seq/Len: 1.16
I_Prob: 0.02

BIOD1 - ATP-dependent dethiobiotin synthetase BioD 1
Paralog alert: 0.29 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: BIOD1 BIOD2
BIOF - 8-amino-7-oxononanoate synthase
Paralog alert: 0.62 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: BIOF KBL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_H 235_G 1.43 0.02
11_D 292_R 1.32 0.01
192_L 172_V 1.22 0.01
88_A 229_L 1.11 0.01
7_V 17_A 1.09 0.01
41_A 205_D 1.06 0.01
75_Y 122_K 1.05 0.01
170_L 362_L 1.05 0.01
14_V 66_A 1.02 0.01
41_A 176_G 1.02 0.01
132_A 205_D 1.01 0.01
127_D 253_D 1.00 0.01
173_W 321_Q 1.00 0.01
82_S 247_C 0.93 0.01
88_A 164_S 0.92 0.00
41_A 208_G 0.92 0.00
14_V 10_A 0.92 0.00
9_G 354_P 0.91 0.00
171_A 185_A 0.91 0.00
80_P 38_D 0.91 0.00
170_L 248_S 0.91 0.00
123_T 78_H 0.91 0.00
143_I 323_L 0.88 0.00
153_I 11_L 0.88 0.00
153_I 172_V 0.88 0.00
135_V 175_E 0.87 0.00
153_I 241_S 0.87 0.00
142_V 239_G 0.87 0.00
13_E 323_L 0.87 0.00
135_V 173_V 0.87 0.00
99_M 229_L 0.86 0.00
207_L 322_P 0.86 0.00
42_S 331_A 0.86 0.00
8_T 263_I 0.86 0.00
77_F 104_L 0.85 0.00
141_P 52_L 0.84 0.00
147_G 73_S 0.84 0.00
156_A 171_M 0.84 0.00
11_D 131_L 0.84 0.00
157_M 193_V 0.84 0.00
19_A 174_T 0.83 0.00
201_L 267_S 0.83 0.00
96_S 143_S 0.83 0.00
74_P 322_P 0.82 0.00
19_A 173_V 0.82 0.00
99_M 324_I 0.82 0.00
134_W 138_E 0.82 0.00
6_F 368_H 0.81 0.00
48_P 333_Q 0.81 0.00
80_P 125_R 0.81 0.00
41_A 257_Q 0.81 0.00
73_N 302_F 0.80 0.00
20_S 120_M 0.80 0.00
95_E 174_T 0.79 0.00
150_L 233_T 0.79 0.00
37_Y 208_G 0.79 0.00
103_L 175_E 0.79 0.00
144_L 113_Q 0.78 0.00
155_H 48_D 0.78 0.00
207_L 335_A 0.77 0.00
84_H 295_L 0.77 0.00
159_T 73_S 0.77 0.00
163_I 137_L 0.77 0.00
118_A 153_N 0.77 0.00
124_P 131_L 0.76 0.00
63_S 313_L 0.76 0.00
134_W 365_T 0.76 0.00
42_S 243_A 0.76 0.00
84_H 364_L 0.76 0.00
86_I 78_H 0.76 0.00
136_T 46_S 0.75 0.00
11_D 376_L 0.75 0.00
139_Q 101_R 0.75 0.00
61_R 188_A 0.75 0.00
137_Q 42_L 0.75 0.00
127_D 291_R 0.75 0.00
13_E 22_R 0.75 0.00
152_C 321_Q 0.75 0.00
124_P 180_M 0.74 0.00
125_L 130_R 0.74 0.00
28_K 323_L 0.74 0.00
203_E 327_D 0.74 0.00
141_P 292_R 0.74 0.00
124_P 364_L 0.73 0.00
175_A 271_A 0.73 0.00
161_Q 71_I 0.73 0.00
40_V 340_Q 0.73 0.00
37_Y 205_D 0.73 0.00
96_S 220_C 0.73 0.00
190_T 304_A 0.73 0.00
40_V 235_G 0.73 0.00
166_A 139_A 0.73 0.00
100_S 138_E 0.73 0.00
14_V 68_Q 0.73 0.00
114_L 38_D 0.73 0.00
13_E 348_I 0.73 0.00
91_G 64_Q 0.73 0.00
88_A 245_V 0.73 0.00
189_M 205_D 0.73 0.00
79_E 203_V 0.73 0.00
19_A 281_A 0.72 0.00
80_P 296_A 0.72 0.00
79_E 254_Y 0.72 0.00
154_N 247_C 0.72 0.00
154_N 377_L 0.72 0.00
77_F 228_E 0.72 0.00
88_A 22_R 0.72 0.00
65_L 324_I 0.71 0.00
159_T 232_V 0.71 0.00
74_P 45_S 0.71 0.00
19_A 76_S 0.71 0.00
160_A 175_E 0.71 0.00
189_M 118_A 0.71 0.00
195_M 188_A 0.71 0.00
123_T 106_I 0.71 0.00
20_S 247_C 0.71 0.00
155_H 292_R 0.71 0.00
165_H 370_M 0.71 0.00
40_V 60_R 0.71 0.00
24_L 208_G 0.71 0.00
84_H 243_A 0.71 0.00
122_F 229_L 0.71 0.00
196_I 376_L 0.71 0.00
122_F 132_S 0.71 0.00
117_G 183_D 0.71 0.00
87_S 78_H 0.70 0.00
146_V 321_Q 0.70 0.00
10_T 70_G 0.70 0.00
124_P 152_H 0.70 0.00
187_E 373_I 0.70 0.00
186_A 150_F 0.70 0.00
176_N 158_L 0.70 0.00
160_A 205_D 0.70 0.00
126_S 224_K 0.70 0.00
122_F 325_V 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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