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OPENSEQ.org

RATA - RATB
UniProt: P0AGL5 - P52119
Length: 254
Sequences: 286
Seq/Len: 1.21
I_Prob: 0.00

RATA - Ribosome association toxin RatA
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RATA
RATB - UPF0125 protein RatB
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RATB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_E 67_H 1.28 0.00
55_S 7_V 1.26 0.00
127_L 77_P 1.23 0.00
110_Q 15_E 1.19 0.00
17_I 12_A 1.19 0.00
140_A 72_V 1.18 0.00
85_Q 20_Q 1.09 0.00
75_F 87_R 1.09 0.00
84_N 60_A 1.07 0.00
139_L 57_S 1.06 0.00
93_D 7_V 1.06 0.00
49_G 12_A 1.05 0.00
104_K 27_G 1.03 0.00
135_V 72_V 1.01 0.00
44_L 58_R 1.01 0.00
106_T 41_E 1.01 0.00
114_R 10_A 0.99 0.00
125_N 64_D 0.99 0.00
87_I 79_I 0.99 0.00
127_L 28_A 0.98 0.00
16_Q 87_R 0.97 0.00
87_I 56_Y 0.97 0.00
20_T 10_A 0.96 0.00
71_I 61_K 0.96 0.00
45_P 17_Q 0.96 0.00
49_G 56_Y 0.93 0.00
154_V 89_R 0.92 0.00
87_I 19_L 0.91 0.00
28_E 32_E 0.91 0.00
140_A 92_K 0.91 0.00
53_L 65_S 0.90 0.00
132_F 61_K 0.90 0.00
145_Q 58_R 0.89 0.00
35_N 8_E 0.89 0.00
86_S 6_A 0.89 0.00
64_V 87_R 0.88 0.00
126_K 28_A 0.87 0.00
73_K 19_L 0.87 0.00
35_N 90_A 0.87 0.00
113_C 91_E 0.87 0.00
64_V 94_A 0.86 0.00
146_A 80_A 0.86 0.00
63_A 39_L 0.86 0.00
58_G 66_V 0.86 0.00
116_E 68_D 0.85 0.00
56_T 6_A 0.85 0.00
149_V 5_I 0.85 0.00
146_A 16_K 0.85 0.00
122_E 14_P 0.85 0.00
72_S 57_S 0.84 0.00
81_L 8_E 0.84 0.00
21_A 9_V 0.84 0.00
140_A 57_S 0.84 0.00
56_T 23_T 0.83 0.00
123_F 38_G 0.83 0.00
56_T 49_T 0.83 0.00
71_I 80_A 0.83 0.00
149_V 16_K 0.83 0.00
84_N 59_P 0.83 0.00
23_V 52_K 0.82 0.00
143_M 14_P 0.82 0.00
38_Q 4_K 0.82 0.00
134_R 58_R 0.81 0.00
51_R 72_V 0.81 0.00
80_Q 32_E 0.81 0.00
121_F 69_G 0.81 0.00
132_F 69_G 0.80 0.00
122_E 46_I 0.80 0.00
93_D 30_V 0.80 0.00
17_I 63_S 0.80 0.00
60_M 13_L 0.80 0.00
31_Y 63_S 0.80 0.00
100_I 24_L 0.79 0.00
20_T 9_V 0.79 0.00
19_R 13_L 0.78 0.00
119_L 38_G 0.78 0.00
78_R 27_G 0.78 0.00
126_K 30_V 0.78 0.00
60_M 93_S 0.78 0.00
50_S 68_D 0.77 0.00
86_S 39_L 0.77 0.00
130_L 46_I 0.77 0.00
52_I 72_V 0.77 0.00
119_L 77_P 0.77 0.00
52_I 15_E 0.76 0.00
123_F 46_I 0.76 0.00
25_Y 94_A 0.76 0.00
109_S 85_L 0.76 0.00
115_I 85_L 0.76 0.00
106_T 55_I 0.75 0.00
73_K 88_Q 0.75 0.00
22_L 61_K 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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