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OPENSEQ.org

RL30 - SECY
UniProt: P0AG51 - P0AGA2
Length: 502
Sequences: 878
Seq/Len: 1.77
I_Prob: 0.01

RL30 - 50S ribosomal protein L30
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL30
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_G 387_I 1.23 0.01
6_K 23_L 1.06 0.01
21_K 160_A 1.05 0.01
21_K 165_V 0.97 0.01
48_I 246_V 0.97 0.01
17_L 71_A 0.96 0.01
35_T 102_L 0.94 0.01
7_I 31_I 0.94 0.01
34_H 33_F 0.93 0.01
14_I 243_R 0.93 0.01
10_T 220_L 0.90 0.01
54_M 228_F 0.90 0.01
48_I 230_V 0.90 0.01
41_T 385_C 0.89 0.01
6_K 197_A 0.88 0.01
48_I 232_F 0.88 0.01
40_D 272_A 0.87 0.01
50_A 415_D 0.87 0.01
41_T 397_V 0.87 0.01
51_V 350_G 0.87 0.01
5_I 353_V 0.86 0.01
10_T 387_I 0.86 0.01
53_F 416_F 0.86 0.01
21_K 269_V 0.85 0.01
7_I 343_A 0.85 0.01
3_K 272_A 0.83 0.01
51_V 424_M 0.83 0.01
48_I 141_N 0.83 0.01
14_I 377_G 0.82 0.01
20_H 96_T 0.82 0.01
57_V 63_M 0.82 0.01
37_E 295_G 0.81 0.01
35_T 356_I 0.81 0.01
34_H 290_I 0.81 0.01
39_E 284_I 0.81 0.01
23_T 235_V 0.81 0.01
47_M 110_E 0.81 0.01
14_I 89_S 0.81 0.01
11_R 43_G 0.81 0.01
36_V 267_L 0.81 0.01
31_R 256_R 0.80 0.01
9_Q 83_M 0.80 0.01
7_I 50_A 0.80 0.01
19_K 82_I 0.80 0.01
11_R 98_V 0.80 0.00
54_M 260_A 0.80 0.00
10_T 378_A 0.79 0.00
55_V 137_T 0.79 0.00
27_L 128_A 0.79 0.00
10_T 364_K 0.79 0.00
45_R 366_I 0.79 0.00
11_R 249_A 0.78 0.00
53_F 26_V 0.78 0.00
57_V 293_W 0.78 0.00
10_T 353_V 0.78 0.00
19_K 342_T 0.78 0.00
21_K 75_A 0.78 0.00
56_K 170_F 0.78 0.00
55_V 197_A 0.78 0.00
36_V 76_S 0.77 0.00
49_N 383_F 0.77 0.00
26_G 385_C 0.77 0.00
32_I 123_G 0.77 0.00
59_E 225_V 0.77 0.00
41_T 313_G 0.77 0.00
15_G 72_L 0.76 0.00
31_R 58_G 0.76 0.00
7_I 197_A 0.76 0.00
45_R 272_A 0.76 0.00
57_V 22_R 0.76 0.00
7_I 324_A 0.75 0.00
44_I 297_G 0.75 0.00
8_T 406_L 0.75 0.00
14_I 75_A 0.75 0.00
14_I 33_F 0.75 0.00
16_R 330_F 0.74 0.00
19_K 132_S 0.74 0.00
38_R 265_L 0.74 0.00
30_R 346_L 0.74 0.00
32_I 97_V 0.74 0.00
4_T 398_P 0.74 0.00
53_F 349_S 0.74 0.00
4_T 306_I 0.73 0.00
13_A 286_F 0.73 0.00
54_M 23_L 0.73 0.00
56_K 323_S 0.73 0.00
15_G 76_S 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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