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OPENSEQ.org

NUSG - RL7
UniProt: P0AFG0 - P0A7K2
Length: 302
Sequences: 886
Seq/Len: 2.98
I_Prob: 0.00

NUSG - Transcription antitermination protein NusG
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUSG RFAH
RL7 - 50S ribosomal protein L7/L12
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL7
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
146_G 103_D 0.89 0.00
163_S 21_V 0.89 0.00
47_E 97_E 0.86 0.00
149_E 119_E 0.82 0.00
171_V 74_R 0.82 0.00
99_R 99_V 0.82 0.00
10_Y 44_G 0.81 0.00
136_V 110_A 0.80 0.00
84_R 56_D 0.80 0.00
122_P 86_D 0.79 0.00
44_V 52_K 0.79 0.00
77_D 82_K 0.78 0.00
63_K 89_E 0.78 0.00
95_G 78_G 0.76 0.00
132_E 109_K 0.74 0.00
151_V 18_M 0.74 0.00
41_E 22_E 0.73 0.00
144_F 83_E 0.71 0.00
53_R 20_V 0.71 0.00
115_L 5_K 0.71 0.00
53_R 39_V 0.70 0.00
69_V 78_G 0.70 0.00
129_E 41_V 0.70 0.00
65_F 23_L 0.70 0.00
54_G 15_M 0.69 0.00
108_V 62_A 0.69 0.00
109_D 107_L 0.68 0.00
126_T 19_D 0.68 0.00
99_R 18_M 0.68 0.00
53_R 118_V 0.68 0.00
168_A 14_A 0.67 0.00
167_R 67_V 0.66 0.00
149_E 12_V 0.66 0.00
147_V 61_A 0.66 0.00
134_V 53_T 0.66 0.00
110_A 52_K 0.66 0.00
46_T 89_E 0.65 0.00
105_D 60_K 0.65 0.00
31_K 32_G 0.65 0.00
36_E 50_E 0.65 0.00
44_V 27_M 0.64 0.00
44_V 109_K 0.64 0.00
141_F 9_I 0.64 0.00
67_G 23_L 0.63 0.00
117_Q 76_A 0.63 0.00
17_G 20_V 0.63 0.00
103_I 77_T 0.63 0.00
52_I 49_A 0.62 0.00
26_L 121_K 0.61 0.00
136_V 7_Q 0.61 0.00
90_M 20_V 0.61 0.00
13_Q 33_V 0.61 0.00
118_V 69_V 0.61 0.00
112_M 34_S 0.61 0.00
74_V 27_M 0.61 0.00
136_V 63_G 0.61 0.00
135_R 119_E 0.61 0.00
152_D 89_E 0.61 0.00
138_D 8_I 0.60 0.00
15_F 24_I 0.60 0.00
117_Q 19_D 0.60 0.00
152_D 52_K 0.60 0.00
72_Q 16_S 0.60 0.00
61_E 12_V 0.60 0.00
90_M 18_M 0.60 0.00
15_F 28_E 0.60 0.00
144_F 53_T 0.60 0.00
51_E 70_I 0.60 0.00
155_K 17_V 0.60 0.00
75_M 106_A 0.59 0.00
82_L 78_G 0.59 0.00
163_S 20_V 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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