May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FEOA - YBFI
UniProt: P0AEL3 - P39901
Length: 140
Sequences: 195
Seq/Len: 1.47
I_Prob: 0.00

FEOA - Ferrous iron transport protein A
Paralog alert: 0.13 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FEOA
YBFI - Putative uncharacterized protein YbfI
Paralog alert: 0.90 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: YBFI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
2_Q 39_L 1.01 0.00
70_V 8_W 0.96 0.00
64_D 63_F 0.92 0.00
70_V 52_H 0.92 0.00
34_G 39_L 0.87 0.00
32_L 10_I 0.87 0.00
60_L 8_W 0.85 0.00
60_L 6_V 0.85 0.00
35_S 36_M 0.84 0.00
11_I 6_V 0.80 0.00
24_Q 5_S 0.80 0.00
11_I 36_M 0.78 0.00
55_R 21_X 0.76 0.00
51_I 59_I 0.76 0.00
64_D 29_S 0.76 0.00
11_I 59_I 0.75 0.00
14_F 20_M 0.73 0.00
19_S 18_R 0.73 0.00
20_P 28_H 0.72 0.00
63_K 11_V 0.71 0.00
26_L 61_Y 0.71 0.00
14_F 48_A 0.70 0.00
52_E 36_M 0.70 0.00
32_L 23_L 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0242 seconds.