May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
CHEY - YGIW
UniProt: P0AE67 - P0ADU5
Length: 259
Sequences: 200
Seq/Len: 0.80
I_Prob: 0.00
CHEY - Chemotaxis protein CheY
Paralog alert: 0.92 [within 20: 0.69] - ratio of genomes with paralogs
Cluster includes: CHEY 		YGIW - Protein YgiW
Paralog alert: 0.59 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YDEI YGIW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_V 122_V 1.03 0.00
55_I 46_V 0.85 0.00
12_D 97_V 0.83 0.00
84_L 85_I 0.79 0.00
7_K 124_Q 0.77 0.00
39_G 1_M 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.0187 seconds.