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OPENSEQ.org

RL14 - RPOA
UniProt: P0ADY3 - P0A7Z4
Length: 452
Sequences: 697
Seq/Len: 1.56
I_Prob: 0.26

RL14 - 50S ribosomal protein L14
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL14
RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_I 213_P 1.53 0.26
14_S 164_D 1.44 0.21
62_V 59_V 1.27 0.13
73_D 197_D 1.21 0.11
6_T 146_V 1.19 0.10
68_G 295_L 1.15 0.09
88_N 180_V 1.14 0.08
65_T 54_C 1.13 0.08
17_R 204_E 1.12 0.08
6_T 208_N 1.12 0.08
6_T 230_A 1.10 0.07
17_R 60_E 1.07 0.07
29_H 184_A 1.07 0.07
17_R 199_D 1.06 0.07
59_K 173_V 1.04 0.06
19_V 184_A 1.04 0.06
78_R 240_P 1.02 0.06
20_M 215_E 1.01 0.05
102_P 299_S 1.01 0.05
77_I 271_K 1.01 0.05
78_R 184_A 1.00 0.05
65_T 216_A 0.99 0.05
51_K 227_Q 0.99 0.05
65_T 21_S 0.99 0.05
23_K 60_E 0.98 0.05
21_C 307_L 0.95 0.04
54_K 297_K 0.95 0.04
62_V 247_P 0.95 0.04
62_V 47_L 0.94 0.04
56_D 99_I 0.94 0.04
14_S 143_R 0.94 0.04
31_R 56_V 0.93 0.04
20_M 47_L 0.93 0.04
53_K 298_K 0.92 0.04
14_S 293_P 0.91 0.04
52_V 221_A 0.91 0.04
51_K 277_Y 0.90 0.04
21_C 290_L 0.89 0.04
123_L 64_V 0.89 0.04
104_T 26_V 0.89 0.03
23_K 75_Q 0.89 0.03
14_S 163_E 0.89 0.03
113_M 155_A 0.89 0.03
123_L 169_G 0.89 0.03
76_V 277_Y 0.88 0.03
78_R 163_E 0.88 0.03
35_V 162_E 0.88 0.03
19_V 182_R 0.87 0.03
21_C 152_Y 0.87 0.03
31_R 150_R 0.87 0.03
72_P 71_K 0.87 0.03
35_V 99_I 0.86 0.03
6_T 21_S 0.86 0.03
56_D 126_P 0.86 0.03
17_R 213_P 0.85 0.03
38_I 156_S 0.85 0.03
95_I 88_L 0.85 0.03
73_D 196_T 0.85 0.03
17_R 308_A 0.85 0.03
116_I 137_N 0.84 0.03
46_A 39_L 0.84 0.03
31_R 228_L 0.84 0.03
6_T 65_L 0.83 0.03
35_V 13_L 0.83 0.03
77_I 135_D 0.83 0.03
116_I 297_K 0.83 0.03
109_S 266_S 0.83 0.03
62_V 305_D 0.83 0.03
102_P 298_K 0.82 0.03
6_T 87_G 0.82 0.03
19_V 123_I 0.82 0.03
86_L 180_V 0.82 0.03
43_I 186_N 0.82 0.03
38_I 110_V 0.82 0.03
123_L 184_A 0.82 0.03
34_G 129_V 0.81 0.03
23_K 143_R 0.81 0.03
19_V 128_H 0.81 0.03
34_G 103_N 0.81 0.03
38_I 124_V 0.81 0.02
112_F 65_L 0.81 0.02
14_S 107_I 0.80 0.02
62_V 116_T 0.80 0.02
48_P 307_L 0.80 0.02
87_L 279_G 0.80 0.02
18_R 157_T 0.80 0.02
55_G 35_F 0.80 0.02
87_L 107_I 0.79 0.02
70_R 113_A 0.79 0.02
69_V 186_N 0.78 0.02
75_S 146_V 0.78 0.02
79_F 296_G 0.78 0.02
43_I 249_F 0.78 0.02
17_R 75_Q 0.78 0.02
23_K 224_L 0.77 0.02
75_S 105_S 0.77 0.02
55_G 50_S 0.77 0.02
30_R 247_P 0.77 0.02
104_T 176_C 0.77 0.02
23_K 26_V 0.77 0.02
6_T 155_A 0.77 0.02
34_G 54_C 0.77 0.02
31_R 234_L 0.76 0.02
2_I 307_L 0.76 0.02
33_A 56_V 0.76 0.02
48_P 106_G 0.76 0.02
83_A 188_E 0.76 0.02
6_T 113_A 0.76 0.02
91_S 133_L 0.75 0.02
35_V 175_A 0.75 0.02
28_S 65_L 0.75 0.02
58_L 156_S 0.75 0.02
92_E 90_V 0.75 0.02
22_I 42_A 0.75 0.02
42_T 140_I 0.75 0.02
109_S 258_D 0.75 0.02
19_V 131_C 0.74 0.02
70_R 211_I 0.74 0.02
86_L 183_I 0.74 0.02
5_Q 47_L 0.74 0.02
19_V 204_E 0.74 0.02
63_V 66_H 0.74 0.02
78_R 85_L 0.74 0.02
114_K 131_C 0.73 0.02
2_I 223_I 0.73 0.02
77_I 226_E 0.73 0.02
17_R 20_S 0.73 0.02
6_T 157_T 0.73 0.02
58_L 3_G 0.73 0.02
81_G 2_Q 0.73 0.02
33_A 312_L 0.73 0.02
75_S 286_E 0.73 0.02
79_F 294_N 0.73 0.02
20_M 206_E 0.72 0.02
88_N 271_K 0.72 0.02
116_I 186_N 0.72 0.02
73_D 183_I 0.72 0.02
14_S 255_R 0.72 0.02
61_V 106_G 0.72 0.02
84_C 80_E 0.72 0.02
2_I 275_I 0.72 0.02
62_V 213_P 0.71 0.02
35_V 26_V 0.71 0.02
99_I 218_R 0.71 0.02
20_M 69_S 0.71 0.02
62_V 94_G 0.71 0.02
77_I 59_V 0.71 0.02
97_T 169_G 0.71 0.02
59_K 118_D 0.71 0.02
84_C 131_C 0.71 0.02
58_L 132_H 0.70 0.02
14_S 157_T 0.70 0.02
69_V 236_D 0.70 0.01
111_K 69_S 0.70 0.01
111_K 255_R 0.70 0.01
14_S 129_V 0.70 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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