| UniProt: | P0ADY3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10875 | ||
| Length: | 123 (122) | ||
| Sequences: | 1052 | ||
| Seq/Len: | 8.62 |
| RL14
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 19_V | 84_C | 3.965 | 1.00 | |
| 41_I | 58_L | 3.827 | 1.00 | |
| 21_C | 39_I | 3.651 | 1.00 | |
| 7_M | 18_R | 3.524 | 1.00 | |
| 5_Q | 20_M | 3.152 | 1.00 | |
| 19_V | 41_I | 3.091 | 1.00 | |
| 2_I | 21_C | 2.332 | 1.00 | |
| 34_G | 68_G | 2.163 | 1.00 | |
| 33_A | 62_V | 2.094 | 1.00 | |
| 20_M | 44_K | 2.057 | 1.00 | |
| 9_N | 81_G | 1.874 | 1.00 | |
| 3_Q | 6_T | 1.787 | 1.00 | |
| 10_V | 19_V | 1.787 | 1.00 | |
| 40_K | 59_K | 1.723 | 1.00 | |
| 18_R | 45_E | 1.716 | 1.00 | |
| 7_M | 20_M | 1.696 | 1.00 | |
| 59_K | 89_N | 1.691 | 1.00 | |
| 51_K | 95_I | 1.68 | 1.00 | |
| 88_N | 92_E | 1.625 | 1.00 | |
| 70_R | 76_V | 1.613 | 1.00 | |
| 60_A | 84_C | 1.576 | 1.00 | |
| 20_M | 42_T | 1.55 | 1.00 | |
| 42_T | 55_G | 1.491 | 1.00 | |
| 19_V | 43_I | 1.487 | 1.00 | |
| 91_S | 111_K | 1.467 | 1.00 | |
| 9_N | 18_R | 1.466 | 1.00 | |
| 34_G | 69_V | 1.457 | 0.99 | |
| 95_I | 109_S | 1.448 | 0.99 | |
| 52_V | 56_D | 1.442 | 0.99 | |
| 103_V | 107_L | 1.427 | 0.99 | |
| 38_I | 112_F | 1.426 | 0.99 | |
| 2_I | 6_T | 1.388 | 0.99 | |
| 35_V | 69_V | 1.362 | 0.99 | |
| 71_R | 106_E | 1.304 | 0.99 | |
| 38_I | 87_L | 1.26 | 0.98 | |
| 77_I | 123_L | 1.246 | 0.98 | |
| 25_L | 40_K | 1.239 | 0.98 | |
| 4_E | 20_M | 1.237 | 0.98 | |
| 2_I | 8_L | 1.227 | 0.98 | |
| 63_V | 103_V | 1.178 | 0.97 | |
| 4_E | 23_K | 1.165 | 0.96 | |
| 86_L | 95_I | 1.118 | 0.95 | |
| 113_M | 116_I | 1.108 | 0.95 | |
| 91_S | 112_F | 1.105 | 0.95 | |
| 68_G | 76_V | 1.092 | 0.94 | |
| 61_V | 115_I | 1.058 | 0.93 | |
| 107_L | 116_I | 1.054 | 0.93 | |
| 58_L | 86_L | 1.053 | 0.93 | |
| 8_L | 39_I | 1.021 | 0.91 | |
| 47_I | 51_K | 1.02 | 0.91 | |
| 7_M | 44_K | 1.01 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1whiA | 1 | 0.9919 | 100 | -0.008 | Contact Map | 0.89 |
| 3v2dO | 1 | 0.9919 | 100 | -0.007 | Contact Map | 0.87 |
| 4kixK | 1 | 0.9919 | 100 | -0.002 | Contact Map | 0.84 |
| 3bboM | 1 | 0.9837 | 100 | 0.005 | Contact Map | 0.662 |
| 3j21J | 1 | 0.9593 | 100 | 0.053 | Contact Map | 0.675 |
| 3zf7W | 1 | 0.9593 | 100 | 0.054 | Contact Map | 0.581 |
| 1vq8K | 1 | 0.9593 | 100 | 0.057 | Contact Map | 0.733 |
| 3u5eV | 1 | 0.9593 | 100 | 0.066 | Contact Map | 0.798 |
| 1pxfA | 1 | 0.748 | 18.9 | 0.937 | Contact Map | 0.008 |
| 3g48A | 2 | 0.6667 | 8.4 | 0.946 | Contact Map | 0.003 |
Sequence Conservation (Image Generated using WebLogo v3)