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OPENSEQ.org

NRDH - NRDI
UniProt: P0AC65 - P0A772
Length: 217
Sequences: 166
Seq/Len: 0.79
I_Prob: 0.02

NRDH - Glutaredoxin-like protein NrdH
Paralog alert: 0.47 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: GLRX1 GLRX3 NRDH
NRDI - Protein NrdI
Paralog alert: 0.07 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRDI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_K 84_R 1.61 0.02
23_N 84_R 1.49 0.01
5_I 43_I 1.44 0.01
7_T 112_M 1.42 0.01
25_G 14_T 1.28 0.01
7_T 12_E 1.24 0.01
67_D 128_F 1.23 0.01
57_G 128_F 1.21 0.01
56_A 91_G 1.20 0.01
5_I 125_V 1.19 0.01
23_N 51_G 1.18 0.01
18_K 75_L 1.16 0.01
67_D 114_T 1.16 0.01
2_R 132_Q 1.15 0.01
25_G 103_V 1.14 0.01
23_N 91_G 1.12 0.01
58_D 45_I 1.09 0.01
68_M 4_L 1.06 0.01
7_T 57_A 1.06 0.01
71_R 61_Q 1.04 0.00
72_L 44_L 1.03 0.00
4_T 135_N 1.03 0.00
19_R 89_A 1.01 0.00
5_I 99_R 1.01 0.00
67_D 77_G 1.00 0.00
25_G 68_D 1.00 0.00
16_A 124_G 1.00 0.00
27_D 19_E 0.99 0.00
51_L 120_N 0.99 0.00
55_I 74_L 0.99 0.00
58_D 99_R 0.98 0.00
58_D 39_D 0.98 0.00
26_F 133_P 0.98 0.00
10_D 81_S 0.97 0.00
64_F 63_I 0.95 0.00
62_S 127_E 0.95 0.00
69_I 93_A 0.94 0.00
35_R 90_Y 0.94 0.00
16_A 94_G 0.94 0.00
3_I 130_Q 0.92 0.00
67_D 106_L 0.91 0.00
4_T 122_R 0.91 0.00
49_R 84_R 0.91 0.00
40_A 112_M 0.91 0.00
26_F 70_H 0.91 0.00
33_V 118_I 0.90 0.00
3_I 42_Y 0.90 0.00
51_L 31_N 0.90 0.00
4_T 9_S 0.90 0.00
68_M 53_G 0.89 0.00
67_D 79_I 0.89 0.00
72_L 121_V 0.89 0.00
64_F 21_L 0.89 0.00
49_R 55_A 0.88 0.00
51_L 9_S 0.88 0.00
68_M 48_S 0.88 0.00
23_N 77_G 0.87 0.00
5_I 91_G 0.87 0.00
7_T 51_G 0.87 0.00
44_R 105_W 0.87 0.00
18_K 106_L 0.86 0.00
6_Y 21_L 0.86 0.00
23_N 120_N 0.86 0.00
58_D 115_Q 0.86 0.00
4_T 98_A 0.85 0.00
41_E 109_F 0.85 0.00
41_E 52_G 0.85 0.00
19_R 126_T 0.85 0.00
32_N 18_I 0.85 0.00
26_F 18_I 0.85 0.00
51_L 61_Q 0.84 0.00
33_V 4_L 0.84 0.00
51_L 18_I 0.84 0.00
18_K 120_N 0.84 0.00
15_H 19_E 0.83 0.00
68_M 57_A 0.83 0.00
4_T 3_Q 0.83 0.00
10_D 54_T 0.82 0.00
37_P 23_L 0.82 0.00
33_V 80_A 0.81 0.00
19_R 34_E 0.81 0.00
39_A 118_I 0.81 0.00
16_A 107_Y 0.80 0.00
49_R 112_M 0.80 0.00
37_P 80_A 0.80 0.00
42_A 57_A 0.80 0.00
21_M 1_M 0.80 0.00
71_R 15_Q 0.79 0.00
3_I 43_I 0.79 0.00
35_R 120_N 0.79 0.00
61_W 72_R 0.79 0.00
72_L 22_G 0.79 0.00
60_S 81_S 0.79 0.00
15_H 12_E 0.78 0.00
28_F 126_T 0.78 0.00
49_R 57_A 0.78 0.00
37_P 22_G 0.77 0.00
72_L 114_T 0.77 0.00
62_S 50_G 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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